Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TP20293 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TP20293 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TP20293 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TP20293 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TP20293 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TP20293 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TP20293 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
TP20293 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.19□□□□□ -0.46
TP20293 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.19□□□□□ -0.46
TP20293 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.19□□□□□ -0.46
TP20293 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TP20293 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TP20293 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TP20293 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
TP20293 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TP20293 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TP20293 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TP20293 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TP20293 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TP20293 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TP20293 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
TP20293 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TP20293 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TP20293 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TP20293 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.19□□□□□ -0.46
TP20293 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TP20293 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TP20293 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.19□□□□□ -0.46
TP20293 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.19□□□□□ -0.46
TP20293 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
TP20293 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
TP20293 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TP20293 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.19□□□□□ -0.46
TP20293 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.19□□□□□ -0.46
TP20293 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TP20293 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.19□□□□□ -0.46
TP20293 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TP20293 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.18□□□□□ -0.46
TP20293 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
TP20293 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TP20293 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TP20293 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.18□□□□□ -0.46
TP20293 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.18□□□□□ -0.46
TP20293 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TP20293 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
TP20293 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TP20293 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TP20293 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.18□□□□□ -0.46
TP20293 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.18□□□□□ -0.46
TP20293 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
TP20293 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TP20293 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.18□□□□□ -0.46
TP20293 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TP20293 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.18□□□□□ -0.46
TP20293 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
TP20293 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TP20293 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
TP20293 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.18□□□□□ -0.46
TP20293 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.18□□□□□ -0.46
TP20293 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.18□□□□□ -0.46
TP20293 Gm5035-201ENSMUST00000215581 927 ntBASIC12.18□□□□□ -0.46
TP20293 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.18□□□□□ -0.46
TP20293 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TP20293 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TP20293 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TP20293 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.18□□□□□ -0.46
TP20293 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TP20293 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TP20293 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TP20293 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TP20293 Matn2-203ENSMUST00000226766 3252 ntBASIC12.18□□□□□ -0.46
TP20293 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.18□□□□□ -0.46
TP20293 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TP20293 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TP20293 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TP20293 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TP20293 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TP20293 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
TP20293 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TP20293 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TP20293 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
TP20293 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
TP20293 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TP20293 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.18□□□□□ -0.46
TP20293 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TP20293 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.18□□□□□ -0.46
TP20293 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.18□□□□□ -0.46
TP20293 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TP20293 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
TP20293 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TP20293 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
TP20293 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
TP20293 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
TP20293 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TP20293 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TP20293 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
TP20293 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TP20293 Gm11814-201ENSMUST00000119515 929 ntBASIC12.17□□□□□ -0.46
TP20293 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms