Protein–RNA interactions for Protein: P10287

Cdh3, Cadherin-3, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh3P10287 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh3P10287 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12□□□□□ -0.49
Cdh3P10287 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh3P10287 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Cdh3P10287 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh3P10287 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Cdh3P10287 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh3P10287 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cdh3P10287 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh3P10287 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh3P10287 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh3P10287 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Cdh3P10287 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh3P10287 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh3P10287 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh3P10287 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh3P10287 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh3P10287 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cdh3P10287 Ldha-ps-201ENSMUST00000119390 995 ntBASIC11.99□□□□□ -0.49
Cdh3P10287 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.99□□□□□ -0.49
Cdh3P10287 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Cdh3P10287 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh3P10287 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh3P10287 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC11.99□□□□□ -0.49
Cdh3P10287 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Cdh3P10287 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh3P10287 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Cdh3P10287 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh3P10287 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh3P10287 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh3P10287 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cdh3P10287 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cdh3P10287 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cdh3P10287 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh3P10287 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh3P10287 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh3P10287 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh3P10287 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh3P10287 AC168058.1-201ENSMUST00000219521 2282 ntBASIC11.99□□□□□ -0.49
Cdh3P10287 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cdh3P10287 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh3P10287 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh3P10287 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh3P10287 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh3P10287 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
Cdh3P10287 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh3P10287 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh3P10287 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh3P10287 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.98□□□□□ -0.49
Cdh3P10287 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh3P10287 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.98□□□□□ -0.49
Cdh3P10287 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh3P10287 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh3P10287 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh3P10287 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.98□□□□□ -0.49
Cdh3P10287 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh3P10287 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh3P10287 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.98□□□□□ -0.49
Cdh3P10287 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.98□□□□□ -0.49
Cdh3P10287 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Cdh3P10287 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh3P10287 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh3P10287 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh3P10287 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh3P10287 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh3P10287 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh3P10287 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Cdh3P10287 Gm15770-201ENSMUST00000117498 584 ntBASIC11.98□□□□□ -0.49
Cdh3P10287 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh3P10287 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC11.98□□□□□ -0.49
Cdh3P10287 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.98□□□□□ -0.49
Cdh3P10287 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh3P10287 Gm43094-201ENSMUST00000196549 921 ntBASIC11.98□□□□□ -0.49
Cdh3P10287 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh3P10287 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh3P10287 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh3P10287 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.98□□□□□ -0.49
Cdh3P10287 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh3P10287 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh3P10287 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cdh3P10287 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh3P10287 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh3P10287 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh3P10287 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh3P10287 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh3P10287 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh3P10287 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.98□□□□□ -0.49
Cdh3P10287 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh3P10287 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh3P10287 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh3P10287 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh3P10287 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh3P10287 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Cdh3P10287 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh3P10287 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cdh3P10287 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh3P10287 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh3P10287 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Cdh3P10287 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.98□□□□□ -0.49
Cdh3P10287 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms