Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
ClcnkaQ9WUB7 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.43■□□□□ 0.7
ClcnkaQ9WUB7 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
ClcnkaQ9WUB7 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.43■□□□□ 0.7
ClcnkaQ9WUB7 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ClcnkaQ9WUB7 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ClcnkaQ9WUB7 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
ClcnkaQ9WUB7 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.42■□□□□ 0.7
ClcnkaQ9WUB7 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.42■□□□□ 0.7
ClcnkaQ9WUB7 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.42■□□□□ 0.7
ClcnkaQ9WUB7 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ClcnkaQ9WUB7 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
ClcnkaQ9WUB7 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ClcnkaQ9WUB7 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ClcnkaQ9WUB7 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ClcnkaQ9WUB7 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.41■□□□□ 0.7
ClcnkaQ9WUB7 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.41■□□□□ 0.7
ClcnkaQ9WUB7 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ClcnkaQ9WUB7 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.41■□□□□ 0.7
ClcnkaQ9WUB7 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ClcnkaQ9WUB7 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ClcnkaQ9WUB7 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ClcnkaQ9WUB7 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ClcnkaQ9WUB7 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
ClcnkaQ9WUB7 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
ClcnkaQ9WUB7 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.4■□□□□ 0.7
ClcnkaQ9WUB7 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.4■□□□□ 0.7
ClcnkaQ9WUB7 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ClcnkaQ9WUB7 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ClcnkaQ9WUB7 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.39■□□□□ 0.7
ClcnkaQ9WUB7 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.39■□□□□ 0.69
ClcnkaQ9WUB7 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ClcnkaQ9WUB7 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ClcnkaQ9WUB7 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ClcnkaQ9WUB7 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ClcnkaQ9WUB7 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
ClcnkaQ9WUB7 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ClcnkaQ9WUB7 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ClcnkaQ9WUB7 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ClcnkaQ9WUB7 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.38■□□□□ 0.69
ClcnkaQ9WUB7 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
ClcnkaQ9WUB7 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.38■□□□□ 0.69
ClcnkaQ9WUB7 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.38■□□□□ 0.69
ClcnkaQ9WUB7 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
ClcnkaQ9WUB7 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ClcnkaQ9WUB7 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ClcnkaQ9WUB7 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
ClcnkaQ9WUB7 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ClcnkaQ9WUB7 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.37■□□□□ 0.69
ClcnkaQ9WUB7 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ClcnkaQ9WUB7 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ClcnkaQ9WUB7 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ClcnkaQ9WUB7 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ClcnkaQ9WUB7 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ClcnkaQ9WUB7 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ClcnkaQ9WUB7 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ClcnkaQ9WUB7 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.36■□□□□ 0.69
ClcnkaQ9WUB7 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.36■□□□□ 0.69
ClcnkaQ9WUB7 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
ClcnkaQ9WUB7 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
ClcnkaQ9WUB7 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ClcnkaQ9WUB7 Gm5921-201ENSMUST00000075898 882 ntBASIC19.36■□□□□ 0.69
ClcnkaQ9WUB7 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ClcnkaQ9WUB7 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ClcnkaQ9WUB7 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ClcnkaQ9WUB7 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ClcnkaQ9WUB7 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ClcnkaQ9WUB7 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
ClcnkaQ9WUB7 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ClcnkaQ9WUB7 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ClcnkaQ9WUB7 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ClcnkaQ9WUB7 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ClcnkaQ9WUB7 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.35■□□□□ 0.69
ClcnkaQ9WUB7 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ClcnkaQ9WUB7 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ClcnkaQ9WUB7 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ClcnkaQ9WUB7 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.35■□□□□ 0.69
ClcnkaQ9WUB7 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ClcnkaQ9WUB7 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ClcnkaQ9WUB7 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ClcnkaQ9WUB7 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
ClcnkaQ9WUB7 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ClcnkaQ9WUB7 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.34■□□□□ 0.69
ClcnkaQ9WUB7 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.34■□□□□ 0.69
ClcnkaQ9WUB7 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.34■□□□□ 0.69
ClcnkaQ9WUB7 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
ClcnkaQ9WUB7 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
ClcnkaQ9WUB7 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.34■□□□□ 0.69
ClcnkaQ9WUB7 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ClcnkaQ9WUB7 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.34■□□□□ 0.69
ClcnkaQ9WUB7 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ClcnkaQ9WUB7 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ClcnkaQ9WUB7 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ClcnkaQ9WUB7 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ClcnkaQ9WUB7 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ClcnkaQ9WUB7 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
ClcnkaQ9WUB7 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ClcnkaQ9WUB7 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ClcnkaQ9WUB7 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.32■□□□□ 0.68
ClcnkaQ9WUB7 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms