Protein–RNA interactions for Protein: Q9DCF9

Ssr3, Translocon-associated protein subunit gamma, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3Q9DCF9 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ssr3Q9DCF9 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ssr3Q9DCF9 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ssr3Q9DCF9 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ssr3Q9DCF9 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ssr3Q9DCF9 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ssr3Q9DCF9 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ssr3Q9DCF9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ssr3Q9DCF9 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ssr3Q9DCF9 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ssr3Q9DCF9 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ssr3Q9DCF9 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Ssr3Q9DCF9 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ssr3Q9DCF9 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ssr3Q9DCF9 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ssr3Q9DCF9 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Ssr3Q9DCF9 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ssr3Q9DCF9 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ssr3Q9DCF9 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ssr3Q9DCF9 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ssr3Q9DCF9 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ssr3Q9DCF9 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ssr3Q9DCF9 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ssr3Q9DCF9 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.82■□□□□ 0.6
Ssr3Q9DCF9 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ssr3Q9DCF9 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ssr3Q9DCF9 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ssr3Q9DCF9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.82■□□□□ 0.6
Ssr3Q9DCF9 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ssr3Q9DCF9 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ssr3Q9DCF9 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssr3Q9DCF9 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ssr3Q9DCF9 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.81■□□□□ 0.6
Ssr3Q9DCF9 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Ssr3Q9DCF9 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssr3Q9DCF9 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ssr3Q9DCF9 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssr3Q9DCF9 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Ssr3Q9DCF9 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Ssr3Q9DCF9 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssr3Q9DCF9 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssr3Q9DCF9 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssr3Q9DCF9 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssr3Q9DCF9 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.8■□□□□ 0.6
Ssr3Q9DCF9 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ssr3Q9DCF9 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Ssr3Q9DCF9 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Ssr3Q9DCF9 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssr3Q9DCF9 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssr3Q9DCF9 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Ssr3Q9DCF9 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssr3Q9DCF9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssr3Q9DCF9 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssr3Q9DCF9 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssr3Q9DCF9 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Ssr3Q9DCF9 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ssr3Q9DCF9 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.79■□□□□ 0.6
Ssr3Q9DCF9 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssr3Q9DCF9 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssr3Q9DCF9 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.79■□□□□ 0.6
Ssr3Q9DCF9 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ssr3Q9DCF9 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Ssr3Q9DCF9 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ssr3Q9DCF9 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.78■□□□□ 0.6
Ssr3Q9DCF9 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.78■□□□□ 0.6
Ssr3Q9DCF9 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Ssr3Q9DCF9 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.78■□□□□ 0.6
Ssr3Q9DCF9 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ssr3Q9DCF9 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ssr3Q9DCF9 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ssr3Q9DCF9 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.78■□□□□ 0.6
Ssr3Q9DCF9 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ssr3Q9DCF9 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ssr3Q9DCF9 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ssr3Q9DCF9 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.77■□□□□ 0.6
Ssr3Q9DCF9 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.77■□□□□ 0.6
Ssr3Q9DCF9 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Ssr3Q9DCF9 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ssr3Q9DCF9 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.76■□□□□ 0.59
Ssr3Q9DCF9 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ssr3Q9DCF9 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ssr3Q9DCF9 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.76■□□□□ 0.59
Ssr3Q9DCF9 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ssr3Q9DCF9 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.76■□□□□ 0.59
Ssr3Q9DCF9 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ssr3Q9DCF9 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Ssr3Q9DCF9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ssr3Q9DCF9 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Ssr3Q9DCF9 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ssr3Q9DCF9 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ssr3Q9DCF9 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.75■□□□□ 0.59
Ssr3Q9DCF9 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssr3Q9DCF9 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssr3Q9DCF9 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.75■□□□□ 0.59
Ssr3Q9DCF9 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.75■□□□□ 0.59
Ssr3Q9DCF9 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ssr3Q9DCF9 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.74■□□□□ 0.59
Ssr3Q9DCF9 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.74■□□□□ 0.59
Ssr3Q9DCF9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Ssr3Q9DCF9 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms