Protein–RNA interactions for Protein: Q9CY16

Mrps28, 28S ribosomal protein S28, mitochondrial, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrps28Q9CY16 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.08■□□□□ 0.65
Mrps28Q9CY16 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Mrps28Q9CY16 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.08■□□□□ 0.65
Mrps28Q9CY16 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
Mrps28Q9CY16 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
Mrps28Q9CY16 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Mrps28Q9CY16 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.08■□□□□ 0.64
Mrps28Q9CY16 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.08■□□□□ 0.64
Mrps28Q9CY16 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Mrps28Q9CY16 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Mrps28Q9CY16 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Mrps28Q9CY16 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.07■□□□□ 0.64
Mrps28Q9CY16 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Mrps28Q9CY16 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Mrps28Q9CY16 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Mrps28Q9CY16 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.07■□□□□ 0.64
Mrps28Q9CY16 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Mrps28Q9CY16 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.06■□□□□ 0.64
Mrps28Q9CY16 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.06■□□□□ 0.64
Mrps28Q9CY16 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Mrps28Q9CY16 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.06■□□□□ 0.64
Mrps28Q9CY16 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Mrps28Q9CY16 Gm43566-201ENSMUST00000196851 808 ntBASIC19.06■□□□□ 0.64
Mrps28Q9CY16 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Mrps28Q9CY16 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Mrps28Q9CY16 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Mrps28Q9CY16 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.06■□□□□ 0.64
Mrps28Q9CY16 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Mrps28Q9CY16 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Mrps28Q9CY16 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Mrps28Q9CY16 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Mrps28Q9CY16 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Mrps28Q9CY16 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.05■□□□□ 0.64
Mrps28Q9CY16 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.05■□□□□ 0.64
Mrps28Q9CY16 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Mrps28Q9CY16 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
Mrps28Q9CY16 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Mrps28Q9CY16 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Mrps28Q9CY16 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.05■□□□□ 0.64
Mrps28Q9CY16 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Mrps28Q9CY16 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Mrps28Q9CY16 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Mrps28Q9CY16 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Mrps28Q9CY16 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.04■□□□□ 0.64
Mrps28Q9CY16 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.04■□□□□ 0.64
Mrps28Q9CY16 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Mrps28Q9CY16 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Mrps28Q9CY16 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Mrps28Q9CY16 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.04■□□□□ 0.64
Mrps28Q9CY16 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Mrps28Q9CY16 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Mrps28Q9CY16 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.03■□□□□ 0.64
Mrps28Q9CY16 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Mrps28Q9CY16 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Mrps28Q9CY16 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Mrps28Q9CY16 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Mrps28Q9CY16 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Mrps28Q9CY16 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Mrps28Q9CY16 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Mrps28Q9CY16 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Mrps28Q9CY16 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Mrps28Q9CY16 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Mrps28Q9CY16 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Mrps28Q9CY16 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Mrps28Q9CY16 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Mrps28Q9CY16 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Mrps28Q9CY16 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Mrps28Q9CY16 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.01■□□□□ 0.63
Mrps28Q9CY16 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Mrps28Q9CY16 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.01■□□□□ 0.63
Mrps28Q9CY16 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
Mrps28Q9CY16 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Mrps28Q9CY16 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Mrps28Q9CY16 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Mrps28Q9CY16 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.01■□□□□ 0.63
Mrps28Q9CY16 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Mrps28Q9CY16 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Mrps28Q9CY16 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Mrps28Q9CY16 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Mrps28Q9CY16 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19■□□□□ 0.63
Mrps28Q9CY16 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19■□□□□ 0.63
Mrps28Q9CY16 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Mrps28Q9CY16 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19■□□□□ 0.63
Mrps28Q9CY16 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Mrps28Q9CY16 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Mrps28Q9CY16 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Mrps28Q9CY16 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Mrps28Q9CY16 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Mrps28Q9CY16 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Mrps28Q9CY16 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
Mrps28Q9CY16 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Mrps28Q9CY16 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.99■□□□□ 0.63
Mrps28Q9CY16 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Mrps28Q9CY16 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.99■□□□□ 0.63
Mrps28Q9CY16 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Mrps28Q9CY16 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Mrps28Q9CY16 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Mrps28Q9CY16 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Mrps28Q9CY16 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Mrps28Q9CY16 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms