Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Chmp1aQ921W0 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Chmp1aQ921W0 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chmp1aQ921W0 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chmp1aQ921W0 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Chmp1aQ921W0 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.58■□□□□ 0.56
Chmp1aQ921W0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Chmp1aQ921W0 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp1aQ921W0 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp1aQ921W0 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Chmp1aQ921W0 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.57■□□□□ 0.56
Chmp1aQ921W0 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp1aQ921W0 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp1aQ921W0 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp1aQ921W0 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Chmp1aQ921W0 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp1aQ921W0 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp1aQ921W0 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp1aQ921W0 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chmp1aQ921W0 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp1aQ921W0 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Chmp1aQ921W0 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp1aQ921W0 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp1aQ921W0 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp1aQ921W0 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp1aQ921W0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.55■□□□□ 0.56
Chmp1aQ921W0 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp1aQ921W0 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chmp1aQ921W0 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.54■□□□□ 0.56
Chmp1aQ921W0 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Chmp1aQ921W0 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp1aQ921W0 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp1aQ921W0 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp1aQ921W0 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chmp1aQ921W0 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Chmp1aQ921W0 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp1aQ921W0 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp1aQ921W0 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC18.53■□□□□ 0.56
Chmp1aQ921W0 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp1aQ921W0 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
Chmp1aQ921W0 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp1aQ921W0 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp1aQ921W0 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp1aQ921W0 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chmp1aQ921W0 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chmp1aQ921W0 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chmp1aQ921W0 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.52■□□□□ 0.56
Chmp1aQ921W0 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Chmp1aQ921W0 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Chmp1aQ921W0 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chmp1aQ921W0 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Chmp1aQ921W0 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chmp1aQ921W0 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Chmp1aQ921W0 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.52■□□□□ 0.55
Chmp1aQ921W0 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Chmp1aQ921W0 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp1aQ921W0 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp1aQ921W0 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp1aQ921W0 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp1aQ921W0 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp1aQ921W0 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Chmp1aQ921W0 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
Chmp1aQ921W0 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chmp1aQ921W0 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp1aQ921W0 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp1aQ921W0 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp1aQ921W0 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp1aQ921W0 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.5■□□□□ 0.55
Chmp1aQ921W0 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.5■□□□□ 0.55
Chmp1aQ921W0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp1aQ921W0 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp1aQ921W0 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
Chmp1aQ921W0 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Chmp1aQ921W0 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chmp1aQ921W0 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp1aQ921W0 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.49■□□□□ 0.55
Chmp1aQ921W0 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp1aQ921W0 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Chmp1aQ921W0 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp1aQ921W0 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp1aQ921W0 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp1aQ921W0 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.49■□□□□ 0.55
Chmp1aQ921W0 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp1aQ921W0 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp1aQ921W0 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chmp1aQ921W0 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
Chmp1aQ921W0 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.49■□□□□ 0.55
Chmp1aQ921W0 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Chmp1aQ921W0 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Chmp1aQ921W0 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Chmp1aQ921W0 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chmp1aQ921W0 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Chmp1aQ921W0 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Chmp1aQ921W0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chmp1aQ921W0 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Chmp1aQ921W0 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Chmp1aQ921W0 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chmp1aQ921W0 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.47■□□□□ 0.55
Chmp1aQ921W0 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chmp1aQ921W0 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms