Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb20Q91XZ9 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb20Q91XZ9 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb20Q91XZ9 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb20Q91XZ9 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.31■□□□□ 0.84
Pcdhb20Q91XZ9 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.31■□□□□ 0.84
Pcdhb20Q91XZ9 Gm7417-201ENSMUST00000192950 473 ntBASIC20.31■□□□□ 0.84
Pcdhb20Q91XZ9 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.31■□□□□ 0.84
Pcdhb20Q91XZ9 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb20Q91XZ9 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb20Q91XZ9 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb20Q91XZ9 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Pcdhb20Q91XZ9 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb20Q91XZ9 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.3■□□□□ 0.84
Pcdhb20Q91XZ9 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb20Q91XZ9 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb20Q91XZ9 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb20Q91XZ9 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Pcdhb20Q91XZ9 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb20Q91XZ9 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.29■□□□□ 0.84
Pcdhb20Q91XZ9 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb20Q91XZ9 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb20Q91XZ9 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb20Q91XZ9 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb20Q91XZ9 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Pcdhb20Q91XZ9 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb20Q91XZ9 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb20Q91XZ9 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb20Q91XZ9 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb20Q91XZ9 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb20Q91XZ9 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb20Q91XZ9 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb20Q91XZ9 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Pcdhb20Q91XZ9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb20Q91XZ9 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Pcdhb20Q91XZ9 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb20Q91XZ9 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb20Q91XZ9 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdhb20Q91XZ9 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdhb20Q91XZ9 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdhb20Q91XZ9 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb20Q91XZ9 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.26■□□□□ 0.83
Pcdhb20Q91XZ9 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Pcdhb20Q91XZ9 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb20Q91XZ9 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.26■□□□□ 0.83
Pcdhb20Q91XZ9 Gm19891-201ENSMUST00000189771 303 ntBASIC20.26■□□□□ 0.83
Pcdhb20Q91XZ9 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb20Q91XZ9 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb20Q91XZ9 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb20Q91XZ9 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb20Q91XZ9 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb20Q91XZ9 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb20Q91XZ9 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Pcdhb20Q91XZ9 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
Pcdhb20Q91XZ9 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.25■□□□□ 0.83
Pcdhb20Q91XZ9 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb20Q91XZ9 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb20Q91XZ9 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb20Q91XZ9 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.24■□□□□ 0.83
Pcdhb20Q91XZ9 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.24■□□□□ 0.83
Pcdhb20Q91XZ9 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb20Q91XZ9 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.24■□□□□ 0.83
Pcdhb20Q91XZ9 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Pcdhb20Q91XZ9 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Pcdhb20Q91XZ9 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb20Q91XZ9 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb20Q91XZ9 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb20Q91XZ9 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb20Q91XZ9 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.23■□□□□ 0.83
Pcdhb20Q91XZ9 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb20Q91XZ9 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.22■□□□□ 0.83
Pcdhb20Q91XZ9 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.22■□□□□ 0.83
Pcdhb20Q91XZ9 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb20Q91XZ9 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.22■□□□□ 0.83
Pcdhb20Q91XZ9 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Pcdhb20Q91XZ9 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb20Q91XZ9 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Pcdhb20Q91XZ9 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb20Q91XZ9 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb20Q91XZ9 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb20Q91XZ9 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb20Q91XZ9 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.21■□□□□ 0.83
Pcdhb20Q91XZ9 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb20Q91XZ9 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb20Q91XZ9 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.21■□□□□ 0.83
Pcdhb20Q91XZ9 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.21■□□□□ 0.83
Pcdhb20Q91XZ9 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Pcdhb20Q91XZ9 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb20Q91XZ9 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb20Q91XZ9 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb20Q91XZ9 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
Pcdhb20Q91XZ9 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb20Q91XZ9 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb20Q91XZ9 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb20Q91XZ9 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Pcdhb20Q91XZ9 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb20Q91XZ9 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.2■□□□□ 0.82
Pcdhb20Q91XZ9 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb20Q91XZ9 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.19■□□□□ 0.82
Pcdhb20Q91XZ9 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms