Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhga9Q91XX9 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.94■□□□□ 0.94
Pcdhga9Q91XX9 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhga9Q91XX9 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhga9Q91XX9 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Pcdhga9Q91XX9 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhga9Q91XX9 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhga9Q91XX9 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.93■□□□□ 0.94
Pcdhga9Q91XX9 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhga9Q91XX9 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhga9Q91XX9 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Pcdhga9Q91XX9 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.93■□□□□ 0.94
Pcdhga9Q91XX9 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhga9Q91XX9 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhga9Q91XX9 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhga9Q91XX9 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhga9Q91XX9 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.92■□□□□ 0.94
Pcdhga9Q91XX9 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhga9Q91XX9 Gm45102-201ENSMUST00000207427 857 ntBASIC20.92■□□□□ 0.94
Pcdhga9Q91XX9 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.92■□□□□ 0.94
Pcdhga9Q91XX9 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhga9Q91XX9 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhga9Q91XX9 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Pcdhga9Q91XX9 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhga9Q91XX9 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.92■□□□□ 0.94
Pcdhga9Q91XX9 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhga9Q91XX9 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhga9Q91XX9 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Pcdhga9Q91XX9 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhga9Q91XX9 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhga9Q91XX9 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhga9Q91XX9 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhga9Q91XX9 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhga9Q91XX9 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhga9Q91XX9 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhga9Q91XX9 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.9■□□□□ 0.94
Pcdhga9Q91XX9 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhga9Q91XX9 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhga9Q91XX9 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.9■□□□□ 0.94
Pcdhga9Q91XX9 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhga9Q91XX9 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.89■□□□□ 0.94
Pcdhga9Q91XX9 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pcdhga9Q91XX9 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhga9Q91XX9 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.89■□□□□ 0.93
Pcdhga9Q91XX9 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhga9Q91XX9 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
Pcdhga9Q91XX9 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhga9Q91XX9 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhga9Q91XX9 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhga9Q91XX9 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhga9Q91XX9 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhga9Q91XX9 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhga9Q91XX9 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhga9Q91XX9 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhga9Q91XX9 Gm14117-201ENSMUST00000122417 843 ntBASIC20.88■□□□□ 0.93
Pcdhga9Q91XX9 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.88■□□□□ 0.93
Pcdhga9Q91XX9 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhga9Q91XX9 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhga9Q91XX9 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Pcdhga9Q91XX9 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.87■□□□□ 0.93
Pcdhga9Q91XX9 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhga9Q91XX9 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.87■□□□□ 0.93
Pcdhga9Q91XX9 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Pcdhga9Q91XX9 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhga9Q91XX9 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.87■□□□□ 0.93
Pcdhga9Q91XX9 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhga9Q91XX9 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhga9Q91XX9 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Pcdhga9Q91XX9 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhga9Q91XX9 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.86■□□□□ 0.93
Pcdhga9Q91XX9 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhga9Q91XX9 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
Pcdhga9Q91XX9 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhga9Q91XX9 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhga9Q91XX9 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Pcdhga9Q91XX9 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.85■□□□□ 0.93
Pcdhga9Q91XX9 Gm9959-201ENSMUST00000068277 390 ntBASIC20.85■□□□□ 0.93
Pcdhga9Q91XX9 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Pcdhga9Q91XX9 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
Pcdhga9Q91XX9 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhga9Q91XX9 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhga9Q91XX9 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhga9Q91XX9 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.84■□□□□ 0.93
Pcdhga9Q91XX9 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.84■□□□□ 0.93
Pcdhga9Q91XX9 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhga9Q91XX9 Gm10232-201ENSMUST00000089221 720 ntBASIC20.84■□□□□ 0.93
Pcdhga9Q91XX9 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Pcdhga9Q91XX9 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhga9Q91XX9 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhga9Q91XX9 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhga9Q91XX9 Gm15039-201ENSMUST00000118914 875 ntBASIC20.83■□□□□ 0.93
Pcdhga9Q91XX9 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhga9Q91XX9 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhga9Q91XX9 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdhga9Q91XX9 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhga9Q91XX9 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhga9Q91XX9 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhga9Q91XX9 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhga9Q91XX9 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhga9Q91XX9 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms