Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.71■□□□□ 0.43
H1fooQ8VIK3 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.71■□□□□ 0.43
H1fooQ8VIK3 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
H1fooQ8VIK3 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
H1fooQ8VIK3 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
H1fooQ8VIK3 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
H1fooQ8VIK3 Gm10420-201ENSMUST00000121713 882 ntBASIC17.7■□□□□ 0.42
H1fooQ8VIK3 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.7■□□□□ 0.42
H1fooQ8VIK3 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
H1fooQ8VIK3 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.69■□□□□ 0.42
H1fooQ8VIK3 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
H1fooQ8VIK3 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
H1fooQ8VIK3 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
H1fooQ8VIK3 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
H1fooQ8VIK3 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.69■□□□□ 0.42
H1fooQ8VIK3 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
H1fooQ8VIK3 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
H1fooQ8VIK3 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
H1fooQ8VIK3 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.69■□□□□ 0.42
H1fooQ8VIK3 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
H1fooQ8VIK3 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
H1fooQ8VIK3 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
H1fooQ8VIK3 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
H1fooQ8VIK3 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
H1fooQ8VIK3 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
H1fooQ8VIK3 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
H1fooQ8VIK3 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
H1fooQ8VIK3 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.68■□□□□ 0.42
H1fooQ8VIK3 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
H1fooQ8VIK3 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
H1fooQ8VIK3 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
H1fooQ8VIK3 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
H1fooQ8VIK3 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
H1fooQ8VIK3 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.68■□□□□ 0.42
H1fooQ8VIK3 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
H1fooQ8VIK3 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
H1fooQ8VIK3 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
H1fooQ8VIK3 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
H1fooQ8VIK3 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.67■□□□□ 0.42
H1fooQ8VIK3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
H1fooQ8VIK3 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
H1fooQ8VIK3 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
H1fooQ8VIK3 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
H1fooQ8VIK3 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
H1fooQ8VIK3 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
H1fooQ8VIK3 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
H1fooQ8VIK3 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
H1fooQ8VIK3 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
H1fooQ8VIK3 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
H1fooQ8VIK3 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
H1fooQ8VIK3 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
H1fooQ8VIK3 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
H1fooQ8VIK3 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
H1fooQ8VIK3 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
H1fooQ8VIK3 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
H1fooQ8VIK3 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
H1fooQ8VIK3 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
H1fooQ8VIK3 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
H1fooQ8VIK3 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
H1fooQ8VIK3 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
H1fooQ8VIK3 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.65■□□□□ 0.42
H1fooQ8VIK3 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
H1fooQ8VIK3 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
H1fooQ8VIK3 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
H1fooQ8VIK3 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
H1fooQ8VIK3 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
H1fooQ8VIK3 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
H1fooQ8VIK3 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.65■□□□□ 0.42
H1fooQ8VIK3 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.64■□□□□ 0.42
H1fooQ8VIK3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
H1fooQ8VIK3 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.64■□□□□ 0.41
H1fooQ8VIK3 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.64■□□□□ 0.41
H1fooQ8VIK3 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
H1fooQ8VIK3 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
H1fooQ8VIK3 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
H1fooQ8VIK3 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
H1fooQ8VIK3 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
H1fooQ8VIK3 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
H1fooQ8VIK3 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
H1fooQ8VIK3 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
H1fooQ8VIK3 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.63■□□□□ 0.41
H1fooQ8VIK3 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
H1fooQ8VIK3 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
H1fooQ8VIK3 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
H1fooQ8VIK3 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
H1fooQ8VIK3 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
H1fooQ8VIK3 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
H1fooQ8VIK3 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.61■□□□□ 0.41
H1fooQ8VIK3 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
H1fooQ8VIK3 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.61■□□□□ 0.41
H1fooQ8VIK3 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.61■□□□□ 0.41
H1fooQ8VIK3 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.61■□□□□ 0.41
H1fooQ8VIK3 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
H1fooQ8VIK3 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
H1fooQ8VIK3 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
H1fooQ8VIK3 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
H1fooQ8VIK3 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
H1fooQ8VIK3 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H1fooQ8VIK3 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
H1fooQ8VIK3 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms