Protein–RNA interactions for Protein: Q8QZR0

Tram1l1, Translocating chain-associated membrane protein 1-like 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1l1Q8QZR0 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Tram1l1Q8QZR0 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tram1l1Q8QZR0 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tram1l1Q8QZR0 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Tram1l1Q8QZR0 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.36■■□□□ 1.01
Tram1l1Q8QZR0 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tram1l1Q8QZR0 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Tram1l1Q8QZR0 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tram1l1Q8QZR0 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tram1l1Q8QZR0 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tram1l1Q8QZR0 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.36■■□□□ 1.01
Tram1l1Q8QZR0 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tram1l1Q8QZR0 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tram1l1Q8QZR0 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tram1l1Q8QZR0 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.35■■□□□ 1.01
Tram1l1Q8QZR0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.35■■□□□ 1.01
Tram1l1Q8QZR0 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tram1l1Q8QZR0 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tram1l1Q8QZR0 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.34■■□□□ 1.01
Tram1l1Q8QZR0 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tram1l1Q8QZR0 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tram1l1Q8QZR0 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tram1l1Q8QZR0 Gm12922-201ENSMUST00000120626 809 ntBASIC21.34■■□□□ 1.01
Tram1l1Q8QZR0 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tram1l1Q8QZR0 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tram1l1Q8QZR0 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Tram1l1Q8QZR0 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Tram1l1Q8QZR0 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tram1l1Q8QZR0 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tram1l1Q8QZR0 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Tram1l1Q8QZR0 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Tram1l1Q8QZR0 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.32■■□□□ 1
Tram1l1Q8QZR0 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Tram1l1Q8QZR0 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
Tram1l1Q8QZR0 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tram1l1Q8QZR0 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Tram1l1Q8QZR0 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.31■■□□□ 1
Tram1l1Q8QZR0 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tram1l1Q8QZR0 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.31■■□□□ 1
Tram1l1Q8QZR0 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tram1l1Q8QZR0 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Tram1l1Q8QZR0 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Tram1l1Q8QZR0 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Tram1l1Q8QZR0 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Tram1l1Q8QZR0 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tram1l1Q8QZR0 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
Tram1l1Q8QZR0 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tram1l1Q8QZR0 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
Tram1l1Q8QZR0 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.3■■□□□ 1
Tram1l1Q8QZR0 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.3■■□□□ 1
Tram1l1Q8QZR0 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.3■■□□□ 1
Tram1l1Q8QZR0 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.3■■□□□ 1
Tram1l1Q8QZR0 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.3■■□□□ 1
Tram1l1Q8QZR0 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.3■■□□□ 1
Tram1l1Q8QZR0 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Tram1l1Q8QZR0 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Tram1l1Q8QZR0 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Tram1l1Q8QZR0 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tram1l1Q8QZR0 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tram1l1Q8QZR0 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tram1l1Q8QZR0 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.29■■□□□ 1
Tram1l1Q8QZR0 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.29■■□□□ 1
Tram1l1Q8QZR0 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Tram1l1Q8QZR0 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tram1l1Q8QZR0 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tram1l1Q8QZR0 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.29■■□□□ 1
Tram1l1Q8QZR0 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tram1l1Q8QZR0 Gm21956-201ENSMUST00000179946 522 ntBASIC21.28■■□□□ 1
Tram1l1Q8QZR0 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Tram1l1Q8QZR0 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Tram1l1Q8QZR0 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.28■■□□□ 1
Tram1l1Q8QZR0 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Tram1l1Q8QZR0 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.27■■□□□ 1
Tram1l1Q8QZR0 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.27■■□□□ 1
Tram1l1Q8QZR0 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.27■■□□□ 1
Tram1l1Q8QZR0 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.27■■□□□ 1
Tram1l1Q8QZR0 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Tram1l1Q8QZR0 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Tram1l1Q8QZR0 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
Tram1l1Q8QZR0 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tram1l1Q8QZR0 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
Tram1l1Q8QZR0 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Tram1l1Q8QZR0 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Tram1l1Q8QZR0 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.25■□□□□ 0.99
Tram1l1Q8QZR0 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tram1l1Q8QZR0 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tram1l1Q8QZR0 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tram1l1Q8QZR0 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.24■□□□□ 0.99
Tram1l1Q8QZR0 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tram1l1Q8QZR0 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tram1l1Q8QZR0 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Tram1l1Q8QZR0 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tram1l1Q8QZR0 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.23■□□□□ 0.99
Tram1l1Q8QZR0 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Tram1l1Q8QZR0 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Tram1l1Q8QZR0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Tram1l1Q8QZR0 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.22■□□□□ 0.99
Tram1l1Q8QZR0 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.22■□□□□ 0.99
Tram1l1Q8QZR0 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.22■□□□□ 0.99
Tram1l1Q8QZR0 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 260.8 ms