Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cystm1Q8K353 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC13.17□□□□□ -0.3
Cystm1Q8K353 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cystm1Q8K353 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Cystm1Q8K353 AC154454.1-201ENSMUST00000225253 216 ntBASIC13.17□□□□□ -0.3
Cystm1Q8K353 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cystm1Q8K353 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cystm1Q8K353 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC13.17□□□□□ -0.3
Cystm1Q8K353 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cystm1Q8K353 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cystm1Q8K353 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cystm1Q8K353 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cystm1Q8K353 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cystm1Q8K353 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cystm1Q8K353 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cystm1Q8K353 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cystm1Q8K353 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC13.16□□□□□ -0.3
Cystm1Q8K353 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cystm1Q8K353 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cystm1Q8K353 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cystm1Q8K353 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cystm1Q8K353 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cystm1Q8K353 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cystm1Q8K353 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cystm1Q8K353 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC13.16□□□□□ -0.3
Cystm1Q8K353 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cystm1Q8K353 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cystm1Q8K353 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cystm1Q8K353 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cystm1Q8K353 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cystm1Q8K353 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cystm1Q8K353 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Cystm1Q8K353 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cystm1Q8K353 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cystm1Q8K353 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC13.15□□□□□ -0.3
Cystm1Q8K353 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC13.15□□□□□ -0.3
Cystm1Q8K353 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Cystm1Q8K353 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC13.15□□□□□ -0.3
Cystm1Q8K353 Gm37136-201ENSMUST00000194368 194 ntBASIC13.15□□□□□ -0.3
Cystm1Q8K353 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cystm1Q8K353 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cystm1Q8K353 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cystm1Q8K353 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cystm1Q8K353 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cystm1Q8K353 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cystm1Q8K353 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cystm1Q8K353 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cystm1Q8K353 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cystm1Q8K353 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cystm1Q8K353 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cystm1Q8K353 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Cystm1Q8K353 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Cystm1Q8K353 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cystm1Q8K353 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cystm1Q8K353 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC13.13□□□□□ -0.31
Cystm1Q8K353 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC13.13□□□□□ -0.31
Cystm1Q8K353 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC13.13□□□□□ -0.31
Cystm1Q8K353 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cystm1Q8K353 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cystm1Q8K353 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC13.13□□□□□ -0.31
Cystm1Q8K353 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cystm1Q8K353 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cystm1Q8K353 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cystm1Q8K353 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Cystm1Q8K353 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cystm1Q8K353 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC13.12□□□□□ -0.31
Cystm1Q8K353 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cystm1Q8K353 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cystm1Q8K353 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cystm1Q8K353 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cystm1Q8K353 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC13.12□□□□□ -0.31
Cystm1Q8K353 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Cystm1Q8K353 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cystm1Q8K353 Gm11175-201ENSMUST00000116172 543 ntBASIC13.12□□□□□ -0.31
Cystm1Q8K353 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cystm1Q8K353 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cystm1Q8K353 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cystm1Q8K353 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cystm1Q8K353 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Cystm1Q8K353 AC115037.1-201ENSMUST00000223391 2173 ntBASIC13.11□□□□□ -0.31
Cystm1Q8K353 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cystm1Q8K353 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cystm1Q8K353 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC13.11□□□□□ -0.31
Cystm1Q8K353 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cystm1Q8K353 Gm4799-201ENSMUST00000095396 657 ntBASIC13.11□□□□□ -0.31
Cystm1Q8K353 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC13.11□□□□□ -0.31
Cystm1Q8K353 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cystm1Q8K353 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cystm1Q8K353 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Cystm1Q8K353 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cystm1Q8K353 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Cystm1Q8K353 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cystm1Q8K353 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cystm1Q8K353 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Cystm1Q8K353 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cystm1Q8K353 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cystm1Q8K353 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cystm1Q8K353 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cystm1Q8K353 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cystm1Q8K353 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms