Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc46a2Q8CA03 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Slc46a2Q8CA03 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc46a2Q8CA03 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Slc46a2Q8CA03 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Slc46a2Q8CA03 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Slc46a2Q8CA03 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc46a2Q8CA03 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc46a2Q8CA03 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Slc46a2Q8CA03 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.31■□□□□ 0.84
Slc46a2Q8CA03 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc46a2Q8CA03 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc46a2Q8CA03 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc46a2Q8CA03 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc46a2Q8CA03 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc46a2Q8CA03 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc46a2Q8CA03 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Slc46a2Q8CA03 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc46a2Q8CA03 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Slc46a2Q8CA03 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc46a2Q8CA03 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc46a2Q8CA03 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.3■□□□□ 0.84
Slc46a2Q8CA03 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc46a2Q8CA03 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc46a2Q8CA03 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.29■□□□□ 0.84
Slc46a2Q8CA03 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc46a2Q8CA03 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc46a2Q8CA03 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc46a2Q8CA03 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc46a2Q8CA03 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc46a2Q8CA03 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Slc46a2Q8CA03 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.28■□□□□ 0.84
Slc46a2Q8CA03 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Slc46a2Q8CA03 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.28■□□□□ 0.84
Slc46a2Q8CA03 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc46a2Q8CA03 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Slc46a2Q8CA03 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc46a2Q8CA03 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Slc46a2Q8CA03 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Slc46a2Q8CA03 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Slc46a2Q8CA03 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc46a2Q8CA03 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Slc46a2Q8CA03 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Slc46a2Q8CA03 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc46a2Q8CA03 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc46a2Q8CA03 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc46a2Q8CA03 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc46a2Q8CA03 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc46a2Q8CA03 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.24■□□□□ 0.83
Slc46a2Q8CA03 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Slc46a2Q8CA03 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc46a2Q8CA03 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc46a2Q8CA03 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.24■□□□□ 0.83
Slc46a2Q8CA03 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc46a2Q8CA03 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc46a2Q8CA03 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc46a2Q8CA03 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc46a2Q8CA03 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc46a2Q8CA03 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Slc46a2Q8CA03 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc46a2Q8CA03 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc46a2Q8CA03 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc46a2Q8CA03 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Slc46a2Q8CA03 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc46a2Q8CA03 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
Slc46a2Q8CA03 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Slc46a2Q8CA03 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc46a2Q8CA03 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Slc46a2Q8CA03 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Slc46a2Q8CA03 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc46a2Q8CA03 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Slc46a2Q8CA03 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.21■□□□□ 0.83
Slc46a2Q8CA03 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Slc46a2Q8CA03 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc46a2Q8CA03 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.21■□□□□ 0.83
Slc46a2Q8CA03 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc46a2Q8CA03 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc46a2Q8CA03 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc46a2Q8CA03 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.2■□□□□ 0.82
Slc46a2Q8CA03 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Slc46a2Q8CA03 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.2■□□□□ 0.82
Slc46a2Q8CA03 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Slc46a2Q8CA03 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc46a2Q8CA03 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc46a2Q8CA03 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Slc46a2Q8CA03 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Slc46a2Q8CA03 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Slc46a2Q8CA03 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.19■□□□□ 0.82
Slc46a2Q8CA03 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.19■□□□□ 0.82
Slc46a2Q8CA03 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Slc46a2Q8CA03 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slc46a2Q8CA03 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slc46a2Q8CA03 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.19■□□□□ 0.82
Slc46a2Q8CA03 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.19■□□□□ 0.82
Slc46a2Q8CA03 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slc46a2Q8CA03 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Slc46a2Q8CA03 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Slc46a2Q8CA03 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slc46a2Q8CA03 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slc46a2Q8CA03 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms