Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cfap54Q8C6S9 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cfap54Q8C6S9 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Cfap54Q8C6S9 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.72■□□□□ 0.91
Cfap54Q8C6S9 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cfap54Q8C6S9 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Cfap54Q8C6S9 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cfap54Q8C6S9 Gm27011-201ENSMUST00000182352 972 ntBASIC20.71■□□□□ 0.91
Cfap54Q8C6S9 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cfap54Q8C6S9 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cfap54Q8C6S9 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cfap54Q8C6S9 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cfap54Q8C6S9 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cfap54Q8C6S9 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Cfap54Q8C6S9 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cfap54Q8C6S9 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.7■□□□□ 0.9
Cfap54Q8C6S9 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cfap54Q8C6S9 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cfap54Q8C6S9 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cfap54Q8C6S9 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cfap54Q8C6S9 Gm10849-201ENSMUST00000100397 618 ntBASIC20.69■□□□□ 0.9
Cfap54Q8C6S9 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cfap54Q8C6S9 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.69■□□□□ 0.9
Cfap54Q8C6S9 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
Cfap54Q8C6S9 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cfap54Q8C6S9 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cfap54Q8C6S9 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cfap54Q8C6S9 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cfap54Q8C6S9 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Cfap54Q8C6S9 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cfap54Q8C6S9 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cfap54Q8C6S9 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cfap54Q8C6S9 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.67■□□□□ 0.9
Cfap54Q8C6S9 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.67■□□□□ 0.9
Cfap54Q8C6S9 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.67■□□□□ 0.9
Cfap54Q8C6S9 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cfap54Q8C6S9 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.67■□□□□ 0.9
Cfap54Q8C6S9 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cfap54Q8C6S9 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cfap54Q8C6S9 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cfap54Q8C6S9 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cfap54Q8C6S9 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cfap54Q8C6S9 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cfap54Q8C6S9 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Cfap54Q8C6S9 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cfap54Q8C6S9 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cfap54Q8C6S9 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.65■□□□□ 0.9
Cfap54Q8C6S9 Gm5874-201ENSMUST00000096101 508 ntBASIC20.65■□□□□ 0.9
Cfap54Q8C6S9 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cfap54Q8C6S9 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cfap54Q8C6S9 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cfap54Q8C6S9 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.65■□□□□ 0.9
Cfap54Q8C6S9 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cfap54Q8C6S9 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cfap54Q8C6S9 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Cfap54Q8C6S9 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cfap54Q8C6S9 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cfap54Q8C6S9 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cfap54Q8C6S9 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cfap54Q8C6S9 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.9
Cfap54Q8C6S9 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cfap54Q8C6S9 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cfap54Q8C6S9 Gm26571-201ENSMUST00000181399 666 ntBASIC20.64■□□□□ 0.89
Cfap54Q8C6S9 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.64■□□□□ 0.89
Cfap54Q8C6S9 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.64■□□□□ 0.89
Cfap54Q8C6S9 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cfap54Q8C6S9 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cfap54Q8C6S9 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cfap54Q8C6S9 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.63■□□□□ 0.89
Cfap54Q8C6S9 Gm43017-201ENSMUST00000198296 752 ntBASIC20.63■□□□□ 0.89
Cfap54Q8C6S9 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cfap54Q8C6S9 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cfap54Q8C6S9 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cfap54Q8C6S9 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cfap54Q8C6S9 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cfap54Q8C6S9 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cfap54Q8C6S9 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cfap54Q8C6S9 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cfap54Q8C6S9 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Cfap54Q8C6S9 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.62■□□□□ 0.89
Cfap54Q8C6S9 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cfap54Q8C6S9 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cfap54Q8C6S9 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.61■□□□□ 0.89
Cfap54Q8C6S9 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.61■□□□□ 0.89
Cfap54Q8C6S9 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cfap54Q8C6S9 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cfap54Q8C6S9 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Cfap54Q8C6S9 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cfap54Q8C6S9 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.61■□□□□ 0.89
Cfap54Q8C6S9 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cfap54Q8C6S9 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cfap54Q8C6S9 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.6■□□□□ 0.89
Cfap54Q8C6S9 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cfap54Q8C6S9 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Cfap54Q8C6S9 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cfap54Q8C6S9 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cfap54Q8C6S9 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cfap54Q8C6S9 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cfap54Q8C6S9 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cfap54Q8C6S9 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms