Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ppp1r3eQ8BRJ4 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ppp1r3eQ8BRJ4 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ppp1r3eQ8BRJ4 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ppp1r3eQ8BRJ4 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.83■□□□□ 0.77
Ppp1r3eQ8BRJ4 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ppp1r3eQ8BRJ4 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ppp1r3eQ8BRJ4 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ppp1r3eQ8BRJ4 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.83■□□□□ 0.77
Ppp1r3eQ8BRJ4 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ppp1r3eQ8BRJ4 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Ppp1r3eQ8BRJ4 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ppp1r3eQ8BRJ4 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ppp1r3eQ8BRJ4 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ppp1r3eQ8BRJ4 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ppp1r3eQ8BRJ4 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ppp1r3eQ8BRJ4 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ppp1r3eQ8BRJ4 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ppp1r3eQ8BRJ4 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
Ppp1r3eQ8BRJ4 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.81■□□□□ 0.76
Ppp1r3eQ8BRJ4 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ppp1r3eQ8BRJ4 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.81■□□□□ 0.76
Ppp1r3eQ8BRJ4 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ppp1r3eQ8BRJ4 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ppp1r3eQ8BRJ4 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ppp1r3eQ8BRJ4 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ppp1r3eQ8BRJ4 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ppp1r3eQ8BRJ4 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ppp1r3eQ8BRJ4 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ppp1r3eQ8BRJ4 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ppp1r3eQ8BRJ4 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ppp1r3eQ8BRJ4 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ppp1r3eQ8BRJ4 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ppp1r3eQ8BRJ4 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Ppp1r3eQ8BRJ4 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Ppp1r3eQ8BRJ4 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ppp1r3eQ8BRJ4 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ppp1r3eQ8BRJ4 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ppp1r3eQ8BRJ4 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ppp1r3eQ8BRJ4 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ppp1r3eQ8BRJ4 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Ppp1r3eQ8BRJ4 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Ppp1r3eQ8BRJ4 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ppp1r3eQ8BRJ4 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ppp1r3eQ8BRJ4 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ppp1r3eQ8BRJ4 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.78■□□□□ 0.76
Ppp1r3eQ8BRJ4 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.78■□□□□ 0.76
Ppp1r3eQ8BRJ4 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ppp1r3eQ8BRJ4 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ppp1r3eQ8BRJ4 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.78■□□□□ 0.76
Ppp1r3eQ8BRJ4 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ppp1r3eQ8BRJ4 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ppp1r3eQ8BRJ4 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ppp1r3eQ8BRJ4 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ppp1r3eQ8BRJ4 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Ppp1r3eQ8BRJ4 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.77■□□□□ 0.76
Ppp1r3eQ8BRJ4 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ppp1r3eQ8BRJ4 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ppp1r3eQ8BRJ4 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ppp1r3eQ8BRJ4 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ppp1r3eQ8BRJ4 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ppp1r3eQ8BRJ4 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.76■□□□□ 0.75
Ppp1r3eQ8BRJ4 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Ppp1r3eQ8BRJ4 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ppp1r3eQ8BRJ4 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ppp1r3eQ8BRJ4 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ppp1r3eQ8BRJ4 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ppp1r3eQ8BRJ4 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ppp1r3eQ8BRJ4 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Ppp1r3eQ8BRJ4 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ppp1r3eQ8BRJ4 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.75■□□□□ 0.75
Ppp1r3eQ8BRJ4 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ppp1r3eQ8BRJ4 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.75■□□□□ 0.75
Ppp1r3eQ8BRJ4 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ppp1r3eQ8BRJ4 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Ppp1r3eQ8BRJ4 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ppp1r3eQ8BRJ4 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ppp1r3eQ8BRJ4 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ppp1r3eQ8BRJ4 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
Ppp1r3eQ8BRJ4 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ppp1r3eQ8BRJ4 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ppp1r3eQ8BRJ4 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ppp1r3eQ8BRJ4 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ppp1r3eQ8BRJ4 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.74■□□□□ 0.75
Ppp1r3eQ8BRJ4 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ppp1r3eQ8BRJ4 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.74■□□□□ 0.75
Ppp1r3eQ8BRJ4 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Ppp1r3eQ8BRJ4 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ppp1r3eQ8BRJ4 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Ppp1r3eQ8BRJ4 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.73■□□□□ 0.75
Ppp1r3eQ8BRJ4 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ppp1r3eQ8BRJ4 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.73■□□□□ 0.75
Ppp1r3eQ8BRJ4 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ppp1r3eQ8BRJ4 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ppp1r3eQ8BRJ4 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ppp1r3eQ8BRJ4 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.72■□□□□ 0.75
Ppp1r3eQ8BRJ4 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.72■□□□□ 0.75
Ppp1r3eQ8BRJ4 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ppp1r3eQ8BRJ4 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ppp1r3eQ8BRJ4 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 101.4 ms