Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atg4bQ8BGE6 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Atg4bQ8BGE6 Gm43566-201ENSMUST00000196851 808 ntBASIC19.99■□□□□ 0.79
Atg4bQ8BGE6 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atg4bQ8BGE6 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Atg4bQ8BGE6 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atg4bQ8BGE6 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atg4bQ8BGE6 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Atg4bQ8BGE6 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.99■□□□□ 0.79
Atg4bQ8BGE6 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.99■□□□□ 0.79
Atg4bQ8BGE6 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Atg4bQ8BGE6 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Atg4bQ8BGE6 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.98■□□□□ 0.79
Atg4bQ8BGE6 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.97■□□□□ 0.79
Atg4bQ8BGE6 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.97■□□□□ 0.79
Atg4bQ8BGE6 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Atg4bQ8BGE6 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Atg4bQ8BGE6 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Atg4bQ8BGE6 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Atg4bQ8BGE6 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
Atg4bQ8BGE6 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Atg4bQ8BGE6 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Atg4bQ8BGE6 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.97■□□□□ 0.79
Atg4bQ8BGE6 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Atg4bQ8BGE6 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Atg4bQ8BGE6 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Atg4bQ8BGE6 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.96■□□□□ 0.79
Atg4bQ8BGE6 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Atg4bQ8BGE6 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Atg4bQ8BGE6 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Atg4bQ8BGE6 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.95■□□□□ 0.78
Atg4bQ8BGE6 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.95■□□□□ 0.78
Atg4bQ8BGE6 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.95■□□□□ 0.78
Atg4bQ8BGE6 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Atg4bQ8BGE6 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Atg4bQ8BGE6 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Atg4bQ8BGE6 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Atg4bQ8BGE6 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Atg4bQ8BGE6 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Atg4bQ8BGE6 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Atg4bQ8BGE6 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.94■□□□□ 0.78
Atg4bQ8BGE6 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Atg4bQ8BGE6 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Atg4bQ8BGE6 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.94■□□□□ 0.78
Atg4bQ8BGE6 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Atg4bQ8BGE6 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Atg4bQ8BGE6 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Atg4bQ8BGE6 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Atg4bQ8BGE6 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Atg4bQ8BGE6 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Atg4bQ8BGE6 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Atg4bQ8BGE6 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Atg4bQ8BGE6 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Atg4bQ8BGE6 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Atg4bQ8BGE6 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
Atg4bQ8BGE6 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.93■□□□□ 0.78
Atg4bQ8BGE6 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.93■□□□□ 0.78
Atg4bQ8BGE6 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
Atg4bQ8BGE6 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Atg4bQ8BGE6 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.93■□□□□ 0.78
Atg4bQ8BGE6 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.93■□□□□ 0.78
Atg4bQ8BGE6 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Atg4bQ8BGE6 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Atg4bQ8BGE6 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Atg4bQ8BGE6 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Atg4bQ8BGE6 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.92■□□□□ 0.78
Atg4bQ8BGE6 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Atg4bQ8BGE6 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Atg4bQ8BGE6 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Atg4bQ8BGE6 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Atg4bQ8BGE6 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.91■□□□□ 0.78
Atg4bQ8BGE6 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
Atg4bQ8BGE6 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Atg4bQ8BGE6 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Atg4bQ8BGE6 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Atg4bQ8BGE6 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Atg4bQ8BGE6 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.9■□□□□ 0.78
Atg4bQ8BGE6 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Atg4bQ8BGE6 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.9■□□□□ 0.78
Atg4bQ8BGE6 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Atg4bQ8BGE6 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Atg4bQ8BGE6 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Atg4bQ8BGE6 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Atg4bQ8BGE6 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Atg4bQ8BGE6 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Atg4bQ8BGE6 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.89■□□□□ 0.77
Atg4bQ8BGE6 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
Atg4bQ8BGE6 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.89■□□□□ 0.77
Atg4bQ8BGE6 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Atg4bQ8BGE6 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.88■□□□□ 0.77
Atg4bQ8BGE6 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Atg4bQ8BGE6 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Atg4bQ8BGE6 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Atg4bQ8BGE6 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Atg4bQ8BGE6 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Atg4bQ8BGE6 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Atg4bQ8BGE6 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Atg4bQ8BGE6 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Atg4bQ8BGE6 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.87■□□□□ 0.77
Atg4bQ8BGE6 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms