Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim50Q810I2 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.64■□□□□ 0.89
Trim50Q810I2 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trim50Q810I2 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim50Q810I2 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trim50Q810I2 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Trim50Q810I2 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.63■□□□□ 0.89
Trim50Q810I2 Gm45444-201ENSMUST00000211394 898 ntBASIC20.63■□□□□ 0.89
Trim50Q810I2 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim50Q810I2 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim50Q810I2 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trim50Q810I2 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim50Q810I2 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim50Q810I2 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim50Q810I2 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim50Q810I2 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim50Q810I2 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim50Q810I2 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim50Q810I2 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim50Q810I2 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.62■□□□□ 0.89
Trim50Q810I2 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Trim50Q810I2 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim50Q810I2 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim50Q810I2 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim50Q810I2 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trim50Q810I2 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trim50Q810I2 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.61■□□□□ 0.89
Trim50Q810I2 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim50Q810I2 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trim50Q810I2 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Trim50Q810I2 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trim50Q810I2 Gm13238-201ENSMUST00000117655 780 ntBASIC20.6■□□□□ 0.89
Trim50Q810I2 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trim50Q810I2 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim50Q810I2 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.6■□□□□ 0.89
Trim50Q810I2 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Trim50Q810I2 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim50Q810I2 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.59■□□□□ 0.89
Trim50Q810I2 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Trim50Q810I2 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim50Q810I2 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim50Q810I2 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
Trim50Q810I2 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim50Q810I2 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim50Q810I2 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim50Q810I2 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim50Q810I2 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim50Q810I2 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Trim50Q810I2 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Trim50Q810I2 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Trim50Q810I2 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim50Q810I2 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.58■□□□□ 0.89
Trim50Q810I2 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim50Q810I2 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Trim50Q810I2 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Trim50Q810I2 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Trim50Q810I2 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim50Q810I2 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim50Q810I2 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim50Q810I2 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.56■□□□□ 0.88
Trim50Q810I2 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Trim50Q810I2 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trim50Q810I2 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim50Q810I2 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trim50Q810I2 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trim50Q810I2 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim50Q810I2 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Trim50Q810I2 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Trim50Q810I2 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Trim50Q810I2 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trim50Q810I2 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim50Q810I2 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trim50Q810I2 Gm43566-201ENSMUST00000196851 808 ntBASIC20.55■□□□□ 0.88
Trim50Q810I2 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Trim50Q810I2 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim50Q810I2 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim50Q810I2 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trim50Q810I2 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Trim50Q810I2 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim50Q810I2 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trim50Q810I2 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trim50Q810I2 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim50Q810I2 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim50Q810I2 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim50Q810I2 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim50Q810I2 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim50Q810I2 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.53■□□□□ 0.88
Trim50Q810I2 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim50Q810I2 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim50Q810I2 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Trim50Q810I2 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.52■□□□□ 0.88
Trim50Q810I2 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim50Q810I2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trim50Q810I2 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trim50Q810I2 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim50Q810I2 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.51■□□□□ 0.87
Trim50Q810I2 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim50Q810I2 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim50Q810I2 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim50Q810I2 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms