Protein–RNA interactions for Protein: Q80YR3

Skida1, SKI/DACH domain-containing protein 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Skida1Q80YR3 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Skida1Q80YR3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.52■□□□□ 0.88
Skida1Q80YR3 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Skida1Q80YR3 Gm9519-201ENSMUST00000206108 1337 ntBASIC20.52■□□□□ 0.87
Skida1Q80YR3 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Skida1Q80YR3 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Skida1Q80YR3 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Skida1Q80YR3 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Skida1Q80YR3 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
Skida1Q80YR3 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Skida1Q80YR3 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC20.51■□□□□ 0.87
Skida1Q80YR3 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Skida1Q80YR3 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.51■□□□□ 0.87
Skida1Q80YR3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.51■□□□□ 0.87
Skida1Q80YR3 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Skida1Q80YR3 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Skida1Q80YR3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.5■□□□□ 0.87
Skida1Q80YR3 AV099323-201ENSMUST00000124336 921 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Skida1Q80YR3 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Skida1Q80YR3 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.5■□□□□ 0.87
Skida1Q80YR3 Gm9847-201ENSMUST00000052528 599 ntBASIC20.5■□□□□ 0.87
Skida1Q80YR3 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Skida1Q80YR3 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Skida1Q80YR3 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Skida1Q80YR3 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Skida1Q80YR3 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Skida1Q80YR3 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.49■□□□□ 0.87
Skida1Q80YR3 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.49■□□□□ 0.87
Skida1Q80YR3 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Skida1Q80YR3 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Skida1Q80YR3 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Skida1Q80YR3 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Skida1Q80YR3 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Skida1Q80YR3 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Skida1Q80YR3 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Skida1Q80YR3 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.47■□□□□ 0.87
Skida1Q80YR3 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Skida1Q80YR3 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Skida1Q80YR3 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Skida1Q80YR3 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Skida1Q80YR3 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Skida1Q80YR3 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Skida1Q80YR3 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Skida1Q80YR3 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Skida1Q80YR3 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.46■□□□□ 0.87
Skida1Q80YR3 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Skida1Q80YR3 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.46■□□□□ 0.87
Skida1Q80YR3 Gm6991-201ENSMUST00000218475 1178 ntBASIC20.46■□□□□ 0.87
Skida1Q80YR3 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Skida1Q80YR3 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.46■□□□□ 0.87
Skida1Q80YR3 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Skida1Q80YR3 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Skida1Q80YR3 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Skida1Q80YR3 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Skida1Q80YR3 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Skida1Q80YR3 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Skida1Q80YR3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Skida1Q80YR3 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Skida1Q80YR3 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Skida1Q80YR3 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Skida1Q80YR3 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Skida1Q80YR3 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.44■□□□□ 0.86
Skida1Q80YR3 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Skida1Q80YR3 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.44■□□□□ 0.86
Skida1Q80YR3 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Skida1Q80YR3 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Skida1Q80YR3 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
Skida1Q80YR3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Skida1Q80YR3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Skida1Q80YR3 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Skida1Q80YR3 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Skida1Q80YR3 Gm13263-201ENSMUST00000121271 838 ntBASIC20.43■□□□□ 0.86
Skida1Q80YR3 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Skida1Q80YR3 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Skida1Q80YR3 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.43■□□□□ 0.86
Skida1Q80YR3 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Skida1Q80YR3 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Skida1Q80YR3 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.42■□□□□ 0.86
Skida1Q80YR3 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.42■□□□□ 0.86
Skida1Q80YR3 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.42■□□□□ 0.86
Skida1Q80YR3 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Skida1Q80YR3 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Skida1Q80YR3 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Skida1Q80YR3 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Skida1Q80YR3 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Skida1Q80YR3 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.41■□□□□ 0.86
Skida1Q80YR3 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.41■□□□□ 0.86
Skida1Q80YR3 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Skida1Q80YR3 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Skida1Q80YR3 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.41■□□□□ 0.86
Skida1Q80YR3 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Skida1Q80YR3 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Skida1Q80YR3 Gm22238-201ENSMUST00000175222 88 ntBASIC20.4■□□□□ 0.86
Skida1Q80YR3 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Skida1Q80YR3 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Skida1Q80YR3 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Skida1Q80YR3 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Skida1Q80YR3 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.39■□□□□ 0.85
Skida1Q80YR3 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Skida1Q80YR3 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms