Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Lrrtm4Q80XG9 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lrrtm4Q80XG9 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lrrtm4Q80XG9 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.68■□□□□ 0.9
Lrrtm4Q80XG9 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Lrrtm4Q80XG9 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Lrrtm4Q80XG9 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Lrrtm4Q80XG9 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lrrtm4Q80XG9 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Lrrtm4Q80XG9 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Lrrtm4Q80XG9 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Lrrtm4Q80XG9 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Lrrtm4Q80XG9 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lrrtm4Q80XG9 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.66■□□□□ 0.9
Lrrtm4Q80XG9 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.66■□□□□ 0.9
Lrrtm4Q80XG9 Etf1-202ENSMUST00000180351 108 ntBASIC20.66■□□□□ 0.9
Lrrtm4Q80XG9 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.66■□□□□ 0.9
Lrrtm4Q80XG9 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lrrtm4Q80XG9 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.66■□□□□ 0.9
Lrrtm4Q80XG9 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Lrrtm4Q80XG9 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Lrrtm4Q80XG9 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lrrtm4Q80XG9 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Lrrtm4Q80XG9 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lrrtm4Q80XG9 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lrrtm4Q80XG9 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lrrtm4Q80XG9 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lrrtm4Q80XG9 Gm14117-201ENSMUST00000122417 843 ntBASIC20.65■□□□□ 0.9
Lrrtm4Q80XG9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.65■□□□□ 0.9
Lrrtm4Q80XG9 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.65■□□□□ 0.9
Lrrtm4Q80XG9 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.65■□□□□ 0.9
Lrrtm4Q80XG9 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lrrtm4Q80XG9 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Lrrtm4Q80XG9 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.9
Lrrtm4Q80XG9 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.64■□□□□ 0.89
Lrrtm4Q80XG9 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Lrrtm4Q80XG9 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.64■□□□□ 0.89
Lrrtm4Q80XG9 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lrrtm4Q80XG9 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Lrrtm4Q80XG9 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Lrrtm4Q80XG9 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.63■□□□□ 0.89
Lrrtm4Q80XG9 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lrrtm4Q80XG9 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lrrtm4Q80XG9 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Lrrtm4Q80XG9 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Lrrtm4Q80XG9 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.63■□□□□ 0.89
Lrrtm4Q80XG9 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lrrtm4Q80XG9 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lrrtm4Q80XG9 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Lrrtm4Q80XG9 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Lrrtm4Q80XG9 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lrrtm4Q80XG9 Gm40881-201ENSMUST00000223397 166 ntBASIC20.62■□□□□ 0.89
Lrrtm4Q80XG9 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lrrtm4Q80XG9 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.61■□□□□ 0.89
Lrrtm4Q80XG9 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lrrtm4Q80XG9 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Lrrtm4Q80XG9 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lrrtm4Q80XG9 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lrrtm4Q80XG9 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lrrtm4Q80XG9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lrrtm4Q80XG9 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.6■□□□□ 0.89
Lrrtm4Q80XG9 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.6■□□□□ 0.89
Lrrtm4Q80XG9 Gm7417-201ENSMUST00000192950 473 ntBASIC20.6■□□□□ 0.89
Lrrtm4Q80XG9 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.6■□□□□ 0.89
Lrrtm4Q80XG9 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Lrrtm4Q80XG9 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lrrtm4Q80XG9 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lrrtm4Q80XG9 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lrrtm4Q80XG9 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Lrrtm4Q80XG9 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lrrtm4Q80XG9 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Lrrtm4Q80XG9 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lrrtm4Q80XG9 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lrrtm4Q80XG9 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Lrrtm4Q80XG9 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Lrrtm4Q80XG9 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lrrtm4Q80XG9 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Lrrtm4Q80XG9 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.58■□□□□ 0.89
Lrrtm4Q80XG9 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lrrtm4Q80XG9 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.58■□□□□ 0.88
Lrrtm4Q80XG9 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Lrrtm4Q80XG9 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Lrrtm4Q80XG9 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Lrrtm4Q80XG9 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.56■□□□□ 0.88
Lrrtm4Q80XG9 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.56■□□□□ 0.88
Lrrtm4Q80XG9 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.56■□□□□ 0.88
Lrrtm4Q80XG9 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.56■□□□□ 0.88
Lrrtm4Q80XG9 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lrrtm4Q80XG9 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lrrtm4Q80XG9 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lrrtm4Q80XG9 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.55■□□□□ 0.88
Lrrtm4Q80XG9 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lrrtm4Q80XG9 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lrrtm4Q80XG9 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lrrtm4Q80XG9 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lrrtm4Q80XG9 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Lrrtm4Q80XG9 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lrrtm4Q80XG9 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lrrtm4Q80XG9 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lrrtm4Q80XG9 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms