Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim36Q80WG7 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim36Q80WG7 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.3■□□□□ 0.84
Trim36Q80WG7 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim36Q80WG7 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim36Q80WG7 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim36Q80WG7 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Trim36Q80WG7 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
Trim36Q80WG7 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim36Q80WG7 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim36Q80WG7 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim36Q80WG7 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim36Q80WG7 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Trim36Q80WG7 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim36Q80WG7 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trim36Q80WG7 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Trim36Q80WG7 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim36Q80WG7 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim36Q80WG7 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim36Q80WG7 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Trim36Q80WG7 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim36Q80WG7 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim36Q80WG7 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.28■□□□□ 0.84
Trim36Q80WG7 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim36Q80WG7 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim36Q80WG7 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trim36Q80WG7 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Trim36Q80WG7 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Trim36Q80WG7 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Trim36Q80WG7 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim36Q80WG7 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Trim36Q80WG7 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim36Q80WG7 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim36Q80WG7 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim36Q80WG7 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim36Q80WG7 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim36Q80WG7 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim36Q80WG7 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim36Q80WG7 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.26■□□□□ 0.83
Trim36Q80WG7 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.26■□□□□ 0.83
Trim36Q80WG7 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim36Q80WG7 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim36Q80WG7 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Trim36Q80WG7 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.25■□□□□ 0.83
Trim36Q80WG7 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim36Q80WG7 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trim36Q80WG7 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Trim36Q80WG7 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.25■□□□□ 0.83
Trim36Q80WG7 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Trim36Q80WG7 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
Trim36Q80WG7 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim36Q80WG7 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim36Q80WG7 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim36Q80WG7 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Trim36Q80WG7 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.24■□□□□ 0.83
Trim36Q80WG7 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim36Q80WG7 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim36Q80WG7 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.23■□□□□ 0.83
Trim36Q80WG7 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim36Q80WG7 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim36Q80WG7 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trim36Q80WG7 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Trim36Q80WG7 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.22■□□□□ 0.83
Trim36Q80WG7 Gm5921-201ENSMUST00000075898 882 ntBASIC20.22■□□□□ 0.83
Trim36Q80WG7 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim36Q80WG7 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.22■□□□□ 0.83
Trim36Q80WG7 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trim36Q80WG7 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim36Q80WG7 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim36Q80WG7 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim36Q80WG7 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trim36Q80WG7 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trim36Q80WG7 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim36Q80WG7 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.21■□□□□ 0.83
Trim36Q80WG7 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim36Q80WG7 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Trim36Q80WG7 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trim36Q80WG7 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim36Q80WG7 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim36Q80WG7 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.2■□□□□ 0.82
Trim36Q80WG7 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim36Q80WG7 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.2■□□□□ 0.82
Trim36Q80WG7 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim36Q80WG7 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim36Q80WG7 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim36Q80WG7 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.19■□□□□ 0.82
Trim36Q80WG7 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim36Q80WG7 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Trim36Q80WG7 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim36Q80WG7 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim36Q80WG7 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trim36Q80WG7 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim36Q80WG7 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim36Q80WG7 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Trim36Q80WG7 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim36Q80WG7 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim36Q80WG7 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim36Q80WG7 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim36Q80WG7 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim36Q80WG7 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 143.2 ms