Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Prpf40bQ80W14 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC24.39■■□□□ 1.49
Prpf40bQ80W14 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Prpf40bQ80W14 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
Prpf40bQ80W14 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Prpf40bQ80W14 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC24.39■■□□□ 1.49
Prpf40bQ80W14 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Prpf40bQ80W14 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Prpf40bQ80W14 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC24.38■■□□□ 1.49
Prpf40bQ80W14 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Prpf40bQ80W14 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Prpf40bQ80W14 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Prpf40bQ80W14 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Prpf40bQ80W14 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC24.37■■□□□ 1.49
Prpf40bQ80W14 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Prpf40bQ80W14 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
Prpf40bQ80W14 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Prpf40bQ80W14 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Prpf40bQ80W14 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC24.37■■□□□ 1.49
Prpf40bQ80W14 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
Prpf40bQ80W14 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Prpf40bQ80W14 Gm8495-201ENSMUST00000188740 694 ntBASIC24.36■■□□□ 1.49
Prpf40bQ80W14 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Prpf40bQ80W14 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Prpf40bQ80W14 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC24.35■■□□□ 1.49
Prpf40bQ80W14 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Prpf40bQ80W14 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC24.35■■□□□ 1.49
Prpf40bQ80W14 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Prpf40bQ80W14 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Prpf40bQ80W14 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Prpf40bQ80W14 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Prpf40bQ80W14 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Prpf40bQ80W14 Gm6934-201ENSMUST00000194780 1905 ntBASIC24.34■■□□□ 1.49
Prpf40bQ80W14 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Prpf40bQ80W14 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Prpf40bQ80W14 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Prpf40bQ80W14 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Prpf40bQ80W14 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Prpf40bQ80W14 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Prpf40bQ80W14 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC24.33■■□□□ 1.49
Prpf40bQ80W14 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC24.33■■□□□ 1.49
Prpf40bQ80W14 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Prpf40bQ80W14 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Prpf40bQ80W14 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Prpf40bQ80W14 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Prpf40bQ80W14 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Prpf40bQ80W14 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Prpf40bQ80W14 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Prpf40bQ80W14 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC24.32■■□□□ 1.48
Prpf40bQ80W14 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC24.32■■□□□ 1.48
Prpf40bQ80W14 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Prpf40bQ80W14 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Prpf40bQ80W14 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Prpf40bQ80W14 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Prpf40bQ80W14 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Prpf40bQ80W14 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Prpf40bQ80W14 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Prpf40bQ80W14 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Prpf40bQ80W14 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Prpf40bQ80W14 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC24.31■■□□□ 1.48
Prpf40bQ80W14 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Prpf40bQ80W14 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Prpf40bQ80W14 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC24.3■■□□□ 1.48
Prpf40bQ80W14 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Prpf40bQ80W14 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC24.3■■□□□ 1.48
Prpf40bQ80W14 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Prpf40bQ80W14 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
Prpf40bQ80W14 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
Prpf40bQ80W14 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC24.29■■□□□ 1.48
Prpf40bQ80W14 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Prpf40bQ80W14 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
Prpf40bQ80W14 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Prpf40bQ80W14 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Prpf40bQ80W14 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Prpf40bQ80W14 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Prpf40bQ80W14 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC24.28■■□□□ 1.48
Prpf40bQ80W14 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Prpf40bQ80W14 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Prpf40bQ80W14 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
Prpf40bQ80W14 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC24.28■■□□□ 1.48
Prpf40bQ80W14 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Prpf40bQ80W14 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
Prpf40bQ80W14 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Prpf40bQ80W14 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC24.27■■□□□ 1.48
Prpf40bQ80W14 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Prpf40bQ80W14 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC24.27■■□□□ 1.48
Prpf40bQ80W14 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC24.27■■□□□ 1.48
Prpf40bQ80W14 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
Prpf40bQ80W14 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Prpf40bQ80W14 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Prpf40bQ80W14 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Prpf40bQ80W14 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Prpf40bQ80W14 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Prpf40bQ80W14 Gm18284-201ENSMUST00000172604 624 ntBASIC24.26■■□□□ 1.47
Prpf40bQ80W14 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Prpf40bQ80W14 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Prpf40bQ80W14 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
Prpf40bQ80W14 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC24.26■■□□□ 1.47
Prpf40bQ80W14 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Prpf40bQ80W14 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC24.25■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms