Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfx4Q7TNK1 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfx4Q7TNK1 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfx4Q7TNK1 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfx4Q7TNK1 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Rfx4Q7TNK1 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfx4Q7TNK1 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Rfx4Q7TNK1 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rfx4Q7TNK1 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Rfx4Q7TNK1 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rfx4Q7TNK1 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rfx4Q7TNK1 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfx4Q7TNK1 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfx4Q7TNK1 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rfx4Q7TNK1 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rfx4Q7TNK1 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rfx4Q7TNK1 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rfx4Q7TNK1 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rfx4Q7TNK1 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rfx4Q7TNK1 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rfx4Q7TNK1 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rfx4Q7TNK1 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rfx4Q7TNK1 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.23■□□□□ 0.83
Rfx4Q7TNK1 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.23■□□□□ 0.83
Rfx4Q7TNK1 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rfx4Q7TNK1 Gm8503-201ENSMUST00000118131 455 ntBASIC20.23■□□□□ 0.83
Rfx4Q7TNK1 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rfx4Q7TNK1 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rfx4Q7TNK1 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rfx4Q7TNK1 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rfx4Q7TNK1 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rfx4Q7TNK1 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rfx4Q7TNK1 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rfx4Q7TNK1 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rfx4Q7TNK1 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rfx4Q7TNK1 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.22■□□□□ 0.83
Rfx4Q7TNK1 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rfx4Q7TNK1 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Rfx4Q7TNK1 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rfx4Q7TNK1 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Rfx4Q7TNK1 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.22■□□□□ 0.83
Rfx4Q7TNK1 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.22■□□□□ 0.83
Rfx4Q7TNK1 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rfx4Q7TNK1 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rfx4Q7TNK1 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rfx4Q7TNK1 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.21■□□□□ 0.83
Rfx4Q7TNK1 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rfx4Q7TNK1 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.21■□□□□ 0.83
Rfx4Q7TNK1 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rfx4Q7TNK1 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rfx4Q7TNK1 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rfx4Q7TNK1 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rfx4Q7TNK1 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rfx4Q7TNK1 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Rfx4Q7TNK1 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rfx4Q7TNK1 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rfx4Q7TNK1 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rfx4Q7TNK1 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.2■□□□□ 0.82
Rfx4Q7TNK1 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rfx4Q7TNK1 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Rfx4Q7TNK1 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rfx4Q7TNK1 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Rfx4Q7TNK1 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rfx4Q7TNK1 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.19■□□□□ 0.82
Rfx4Q7TNK1 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rfx4Q7TNK1 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rfx4Q7TNK1 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rfx4Q7TNK1 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rfx4Q7TNK1 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.19■□□□□ 0.82
Rfx4Q7TNK1 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.18■□□□□ 0.82
Rfx4Q7TNK1 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Rfx4Q7TNK1 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rfx4Q7TNK1 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rfx4Q7TNK1 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rfx4Q7TNK1 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rfx4Q7TNK1 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.17■□□□□ 0.82
Rfx4Q7TNK1 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rfx4Q7TNK1 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rfx4Q7TNK1 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rfx4Q7TNK1 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rfx4Q7TNK1 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rfx4Q7TNK1 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rfx4Q7TNK1 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.16■□□□□ 0.82
Rfx4Q7TNK1 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.16■□□□□ 0.82
Rfx4Q7TNK1 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rfx4Q7TNK1 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Rfx4Q7TNK1 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rfx4Q7TNK1 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Rfx4Q7TNK1 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rfx4Q7TNK1 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rfx4Q7TNK1 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.15■□□□□ 0.82
Rfx4Q7TNK1 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rfx4Q7TNK1 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Rfx4Q7TNK1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rfx4Q7TNK1 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rfx4Q7TNK1 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rfx4Q7TNK1 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Rfx4Q7TNK1 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Rfx4Q7TNK1 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rfx4Q7TNK1 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms