Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.59■□□□□ 0.57
Traf4Q61382 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Traf4Q61382 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Traf4Q61382 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Traf4Q61382 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Traf4Q61382 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Traf4Q61382 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Traf4Q61382 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Traf4Q61382 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.58■□□□□ 0.56
Traf4Q61382 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Traf4Q61382 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Traf4Q61382 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Traf4Q61382 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.58■□□□□ 0.56
Traf4Q61382 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Traf4Q61382 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Traf4Q61382 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Traf4Q61382 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Traf4Q61382 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Traf4Q61382 Gm45102-201ENSMUST00000207427 857 ntBASIC18.57■□□□□ 0.56
Traf4Q61382 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Traf4Q61382 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Traf4Q61382 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Traf4Q61382 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Traf4Q61382 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Traf4Q61382 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Traf4Q61382 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.56■□□□□ 0.56
Traf4Q61382 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.56■□□□□ 0.56
Traf4Q61382 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Traf4Q61382 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Traf4Q61382 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Traf4Q61382 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.56■□□□□ 0.56
Traf4Q61382 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Traf4Q61382 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Traf4Q61382 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Traf4Q61382 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Traf4Q61382 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Traf4Q61382 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Traf4Q61382 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.55■□□□□ 0.56
Traf4Q61382 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Traf4Q61382 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Traf4Q61382 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Traf4Q61382 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Traf4Q61382 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Traf4Q61382 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Traf4Q61382 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Traf4Q61382 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Traf4Q61382 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.54■□□□□ 0.56
Traf4Q61382 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.54■□□□□ 0.56
Traf4Q61382 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Traf4Q61382 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Traf4Q61382 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Traf4Q61382 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Traf4Q61382 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Traf4Q61382 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Traf4Q61382 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Traf4Q61382 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Traf4Q61382 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Traf4Q61382 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.52■□□□□ 0.56
Traf4Q61382 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Traf4Q61382 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Traf4Q61382 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.52■□□□□ 0.56
Traf4Q61382 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Traf4Q61382 Gm14117-201ENSMUST00000122417 843 ntBASIC18.52■□□□□ 0.56
Traf4Q61382 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.52■□□□□ 0.56
Traf4Q61382 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Traf4Q61382 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Traf4Q61382 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Traf4Q61382 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Traf4Q61382 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Traf4Q61382 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Traf4Q61382 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Traf4Q61382 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.51■□□□□ 0.55
Traf4Q61382 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.51■□□□□ 0.55
Traf4Q61382 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Traf4Q61382 Gm10232-201ENSMUST00000089221 720 ntBASIC18.51■□□□□ 0.55
Traf4Q61382 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Traf4Q61382 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Traf4Q61382 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Traf4Q61382 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Traf4Q61382 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Traf4Q61382 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Traf4Q61382 Gm9959-201ENSMUST00000068277 390 ntBASIC18.5■□□□□ 0.55
Traf4Q61382 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Traf4Q61382 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Traf4Q61382 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Traf4Q61382 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Traf4Q61382 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Traf4Q61382 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Traf4Q61382 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Traf4Q61382 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.49■□□□□ 0.55
Traf4Q61382 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Traf4Q61382 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Traf4Q61382 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Traf4Q61382 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Traf4Q61382 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Traf4Q61382 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Traf4Q61382 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Traf4Q61382 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.47■□□□□ 0.55
Traf4Q61382 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Traf4Q61382 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms