Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ClpbQ60649 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ClpbQ60649 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ClpbQ60649 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ClpbQ60649 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
ClpbQ60649 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ClpbQ60649 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ClpbQ60649 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ClpbQ60649 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ClpbQ60649 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ClpbQ60649 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ClpbQ60649 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ClpbQ60649 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ClpbQ60649 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.24■□□□□ 0.83
ClpbQ60649 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
ClpbQ60649 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ClpbQ60649 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.24■□□□□ 0.83
ClpbQ60649 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.24■□□□□ 0.83
ClpbQ60649 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
ClpbQ60649 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ClpbQ60649 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ClpbQ60649 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.24■□□□□ 0.83
ClpbQ60649 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ClpbQ60649 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ClpbQ60649 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.23■□□□□ 0.83
ClpbQ60649 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ClpbQ60649 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ClpbQ60649 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
ClpbQ60649 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ClpbQ60649 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
ClpbQ60649 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.22■□□□□ 0.83
ClpbQ60649 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
ClpbQ60649 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
ClpbQ60649 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ClpbQ60649 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ClpbQ60649 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.22■□□□□ 0.83
ClpbQ60649 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
ClpbQ60649 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ClpbQ60649 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ClpbQ60649 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ClpbQ60649 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ClpbQ60649 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ClpbQ60649 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
ClpbQ60649 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.21■□□□□ 0.83
ClpbQ60649 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.21■□□□□ 0.83
ClpbQ60649 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.21■□□□□ 0.83
ClpbQ60649 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ClpbQ60649 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
ClpbQ60649 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ClpbQ60649 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
ClpbQ60649 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ClpbQ60649 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ClpbQ60649 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ClpbQ60649 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
ClpbQ60649 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ClpbQ60649 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.2■□□□□ 0.82
ClpbQ60649 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ClpbQ60649 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ClpbQ60649 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ClpbQ60649 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
ClpbQ60649 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.19■□□□□ 0.82
ClpbQ60649 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ClpbQ60649 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ClpbQ60649 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ClpbQ60649 Gm15820-201ENSMUST00000201566 728 ntBASIC20.19■□□□□ 0.82
ClpbQ60649 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ClpbQ60649 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
ClpbQ60649 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.18■□□□□ 0.82
ClpbQ60649 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ClpbQ60649 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ClpbQ60649 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.18■□□□□ 0.82
ClpbQ60649 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ClpbQ60649 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ClpbQ60649 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ClpbQ60649 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ClpbQ60649 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.17■□□□□ 0.82
ClpbQ60649 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.17■□□□□ 0.82
ClpbQ60649 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ClpbQ60649 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ClpbQ60649 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ClpbQ60649 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ClpbQ60649 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ClpbQ60649 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.16■□□□□ 0.82
ClpbQ60649 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
ClpbQ60649 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ClpbQ60649 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ClpbQ60649 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.16■□□□□ 0.82
ClpbQ60649 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
ClpbQ60649 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ClpbQ60649 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ClpbQ60649 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.15■□□□□ 0.82
ClpbQ60649 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ClpbQ60649 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.15■□□□□ 0.82
ClpbQ60649 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ClpbQ60649 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ClpbQ60649 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ClpbQ60649 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ClpbQ60649 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ClpbQ60649 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
ClpbQ60649 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms