Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.29■■□□□ 1
ThraP63058 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.29■■□□□ 1
ThraP63058 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
ThraP63058 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ThraP63058 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ThraP63058 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ThraP63058 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
ThraP63058 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ThraP63058 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.28■■□□□ 1
ThraP63058 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.28■■□□□ 1
ThraP63058 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ThraP63058 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.28■■□□□ 1
ThraP63058 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
ThraP63058 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
ThraP63058 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ThraP63058 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
ThraP63058 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.27■■□□□ 1
ThraP63058 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
ThraP63058 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ThraP63058 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
ThraP63058 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ThraP63058 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.26■□□□□ 0.99
ThraP63058 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
ThraP63058 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ThraP63058 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ThraP63058 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
ThraP63058 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.25■□□□□ 0.99
ThraP63058 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ThraP63058 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ThraP63058 Gm14117-201ENSMUST00000122417 843 ntBASIC21.25■□□□□ 0.99
ThraP63058 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ThraP63058 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ThraP63058 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
ThraP63058 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
ThraP63058 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ThraP63058 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ThraP63058 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ThraP63058 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
ThraP63058 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ThraP63058 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ThraP63058 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ThraP63058 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ThraP63058 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.24■□□□□ 0.99
ThraP63058 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.24■□□□□ 0.99
ThraP63058 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ThraP63058 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ThraP63058 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ThraP63058 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ThraP63058 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ThraP63058 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ThraP63058 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
ThraP63058 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
ThraP63058 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.23■□□□□ 0.99
ThraP63058 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ThraP63058 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ThraP63058 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ThraP63058 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ThraP63058 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ThraP63058 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.23■□□□□ 0.99
ThraP63058 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ThraP63058 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ThraP63058 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
ThraP63058 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
ThraP63058 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ThraP63058 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.22■□□□□ 0.99
ThraP63058 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ThraP63058 Gm9959-201ENSMUST00000068277 390 ntBASIC21.22■□□□□ 0.99
ThraP63058 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ThraP63058 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ThraP63058 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ThraP63058 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
ThraP63058 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
ThraP63058 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ThraP63058 Gm15039-201ENSMUST00000118914 875 ntBASIC21.21■□□□□ 0.99
ThraP63058 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.21■□□□□ 0.99
ThraP63058 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
ThraP63058 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ThraP63058 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ThraP63058 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.2■□□□□ 0.98
ThraP63058 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ThraP63058 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.2■□□□□ 0.98
ThraP63058 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ThraP63058 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ThraP63058 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ThraP63058 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
ThraP63058 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ThraP63058 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ThraP63058 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ThraP63058 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ThraP63058 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ThraP63058 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ThraP63058 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
ThraP63058 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
ThraP63058 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
ThraP63058 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ThraP63058 Gm10232-201ENSMUST00000089221 720 ntBASIC21.18■□□□□ 0.98
ThraP63058 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ThraP63058 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ThraP63058 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
ThraP63058 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms