Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lhx1P63006 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lhx1P63006 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lhx1P63006 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lhx1P63006 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lhx1P63006 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Lhx1P63006 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lhx1P63006 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lhx1P63006 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Lhx1P63006 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Lhx1P63006 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lhx1P63006 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lhx1P63006 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Lhx1P63006 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lhx1P63006 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lhx1P63006 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Lhx1P63006 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.86■□□□□ 0.93
Lhx1P63006 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lhx1P63006 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lhx1P63006 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lhx1P63006 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Lhx1P63006 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lhx1P63006 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lhx1P63006 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lhx1P63006 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lhx1P63006 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Lhx1P63006 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Lhx1P63006 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lhx1P63006 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lhx1P63006 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Lhx1P63006 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.85■□□□□ 0.93
Lhx1P63006 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Lhx1P63006 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lhx1P63006 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Lhx1P63006 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lhx1P63006 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.84■□□□□ 0.93
Lhx1P63006 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Lhx1P63006 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.84■□□□□ 0.93
Lhx1P63006 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.84■□□□□ 0.93
Lhx1P63006 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.84■□□□□ 0.93
Lhx1P63006 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Lhx1P63006 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lhx1P63006 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lhx1P63006 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Lhx1P63006 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lhx1P63006 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Lhx1P63006 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lhx1P63006 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lhx1P63006 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lhx1P63006 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lhx1P63006 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Lhx1P63006 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Lhx1P63006 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Lhx1P63006 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.82■□□□□ 0.92
Lhx1P63006 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.82■□□□□ 0.92
Lhx1P63006 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Lhx1P63006 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.82■□□□□ 0.92
Lhx1P63006 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.82■□□□□ 0.92
Lhx1P63006 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.82■□□□□ 0.92
Lhx1P63006 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Lhx1P63006 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lhx1P63006 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
Lhx1P63006 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lhx1P63006 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lhx1P63006 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lhx1P63006 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Lhx1P63006 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.81■□□□□ 0.92
Lhx1P63006 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lhx1P63006 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.8■□□□□ 0.92
Lhx1P63006 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.8■□□□□ 0.92
Lhx1P63006 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lhx1P63006 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Lhx1P63006 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Lhx1P63006 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lhx1P63006 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.79■□□□□ 0.92
Lhx1P63006 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lhx1P63006 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.79■□□□□ 0.92
Lhx1P63006 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.79■□□□□ 0.92
Lhx1P63006 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.79■□□□□ 0.92
Lhx1P63006 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lhx1P63006 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Lhx1P63006 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lhx1P63006 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.78■□□□□ 0.92
Lhx1P63006 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lhx1P63006 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Lhx1P63006 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lhx1P63006 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lhx1P63006 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.77■□□□□ 0.92
Lhx1P63006 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lhx1P63006 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lhx1P63006 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lhx1P63006 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Lhx1P63006 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lhx1P63006 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lhx1P63006 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lhx1P63006 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lhx1P63006 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lhx1P63006 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Lhx1P63006 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Lhx1P63006 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms