Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rps28P62858 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rps28P62858 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Rps28P62858 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rps28P62858 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rps28P62858 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Rps28P62858 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rps28P62858 Gm5784-201ENSMUST00000179344 2478 ntBASIC12.7□□□□□ -0.38
Rps28P62858 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
Rps28P62858 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rps28P62858 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rps28P62858 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rps28P62858 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rps28P62858 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Rps28P62858 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rps28P62858 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Rps28P62858 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rps28P62858 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rps28P62858 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rps28P62858 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rps28P62858 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rps28P62858 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rps28P62858 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rps28P62858 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rps28P62858 Gm9910-201ENSMUST00000195385 1550 ntBASIC12.69□□□□□ -0.38
Rps28P62858 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rps28P62858 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rps28P62858 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Rps28P62858 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rps28P62858 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rps28P62858 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rps28P62858 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rps28P62858 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rps28P62858 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Rps28P62858 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rps28P62858 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rps28P62858 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rps28P62858 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rps28P62858 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rps28P62858 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rps28P62858 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rps28P62858 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Rps28P62858 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Rps28P62858 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rps28P62858 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rps28P62858 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rps28P62858 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rps28P62858 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rps28P62858 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rps28P62858 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC12.68□□□□□ -0.38
Rps28P62858 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Rps28P62858 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC12.68□□□□□ -0.38
Rps28P62858 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rps28P62858 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rps28P62858 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rps28P62858 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rps28P62858 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rps28P62858 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Rps28P62858 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rps28P62858 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rps28P62858 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rps28P62858 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rps28P62858 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rps28P62858 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rps28P62858 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rps28P62858 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rps28P62858 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rps28P62858 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Rps28P62858 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rps28P62858 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Rps28P62858 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rps28P62858 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Rps28P62858 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rps28P62858 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rps28P62858 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rps28P62858 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rps28P62858 Gm37194-201ENSMUST00000193092 3031 ntBASIC12.65□□□□□ -0.38
Rps28P62858 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rps28P62858 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rps28P62858 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Rps28P62858 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Rps28P62858 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rps28P62858 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rps28P62858 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rps28P62858 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rps28P62858 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rps28P62858 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rps28P62858 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rps28P62858 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rps28P62858 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rps28P62858 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rps28P62858 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Rps28P62858 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rps28P62858 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rps28P62858 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rps28P62858 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rps28P62858 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rps28P62858 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rps28P62858 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rps28P62858 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms