Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.58■□□□□ 0.56
Lsm6P62313 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Lsm6P62313 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lsm6P62313 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lsm6P62313 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lsm6P62313 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Lsm6P62313 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lsm6P62313 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Lsm6P62313 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.57■□□□□ 0.56
Lsm6P62313 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lsm6P62313 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lsm6P62313 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lsm6P62313 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm6P62313 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm6P62313 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm6P62313 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm6P62313 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
Lsm6P62313 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm6P62313 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm6P62313 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm6P62313 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm6P62313 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm6P62313 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Lsm6P62313 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lsm6P62313 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.55■□□□□ 0.56
Lsm6P62313 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lsm6P62313 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lsm6P62313 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.55■□□□□ 0.56
Lsm6P62313 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lsm6P62313 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lsm6P62313 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lsm6P62313 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.54■□□□□ 0.56
Lsm6P62313 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Lsm6P62313 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.54■□□□□ 0.56
Lsm6P62313 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lsm6P62313 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.54■□□□□ 0.56
Lsm6P62313 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lsm6P62313 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Lsm6P62313 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
Lsm6P62313 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lsm6P62313 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Lsm6P62313 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lsm6P62313 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lsm6P62313 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lsm6P62313 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Lsm6P62313 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Lsm6P62313 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lsm6P62313 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.52■□□□□ 0.56
Lsm6P62313 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.52■□□□□ 0.56
Lsm6P62313 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.52■□□□□ 0.56
Lsm6P62313 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Lsm6P62313 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lsm6P62313 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Lsm6P62313 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.51■□□□□ 0.55
Lsm6P62313 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Lsm6P62313 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Lsm6P62313 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Lsm6P62313 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Lsm6P62313 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.5■□□□□ 0.55
Lsm6P62313 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.5■□□□□ 0.55
Lsm6P62313 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lsm6P62313 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lsm6P62313 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lsm6P62313 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Lsm6P62313 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Lsm6P62313 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lsm6P62313 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Lsm6P62313 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lsm6P62313 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lsm6P62313 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Lsm6P62313 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lsm6P62313 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lsm6P62313 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Lsm6P62313 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Lsm6P62313 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Lsm6P62313 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Lsm6P62313 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.48■□□□□ 0.55
Lsm6P62313 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lsm6P62313 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Lsm6P62313 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lsm6P62313 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.48■□□□□ 0.55
Lsm6P62313 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Lsm6P62313 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.48■□□□□ 0.55
Lsm6P62313 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lsm6P62313 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Lsm6P62313 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lsm6P62313 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.47■□□□□ 0.55
Lsm6P62313 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lsm6P62313 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.47■□□□□ 0.55
Lsm6P62313 Gm45444-201ENSMUST00000211394 898 ntBASIC18.47■□□□□ 0.55
Lsm6P62313 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.47■□□□□ 0.55
Lsm6P62313 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Lsm6P62313 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lsm6P62313 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lsm6P62313 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lsm6P62313 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Lsm6P62313 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lsm6P62313 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lsm6P62313 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Lsm6P62313 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms