Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Abca1P41233 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Abca1P41233 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Abca1P41233 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Abca1P41233 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Abca1P41233 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Abca1P41233 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Abca1P41233 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.47■□□□□ 0.39
Abca1P41233 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Abca1P41233 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Abca1P41233 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Abca1P41233 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Abca1P41233 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Abca1P41233 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Abca1P41233 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Abca1P41233 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.46■□□□□ 0.39
Abca1P41233 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Abca1P41233 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Abca1P41233 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC17.45■□□□□ 0.38
Abca1P41233 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Abca1P41233 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.45■□□□□ 0.38
Abca1P41233 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Abca1P41233 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Abca1P41233 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Abca1P41233 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Abca1P41233 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Abca1P41233 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Abca1P41233 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.44■□□□□ 0.38
Abca1P41233 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Abca1P41233 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Abca1P41233 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Abca1P41233 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Abca1P41233 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Abca1P41233 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.43■□□□□ 0.38
Abca1P41233 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Abca1P41233 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Abca1P41233 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Abca1P41233 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Abca1P41233 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Abca1P41233 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Abca1P41233 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.42■□□□□ 0.38
Abca1P41233 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Abca1P41233 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.41■□□□□ 0.38
Abca1P41233 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC17.41■□□□□ 0.38
Abca1P41233 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Abca1P41233 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.41■□□□□ 0.38
Abca1P41233 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Abca1P41233 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Abca1P41233 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Abca1P41233 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Abca1P41233 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.41■□□□□ 0.38
Abca1P41233 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Abca1P41233 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.41■□□□□ 0.38
Abca1P41233 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Abca1P41233 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Abca1P41233 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Abca1P41233 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Abca1P41233 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Abca1P41233 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Abca1P41233 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Abca1P41233 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Abca1P41233 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Abca1P41233 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Abca1P41233 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Abca1P41233 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Abca1P41233 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Abca1P41233 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Abca1P41233 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Abca1P41233 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Abca1P41233 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Abca1P41233 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Abca1P41233 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Abca1P41233 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Abca1P41233 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Abca1P41233 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Abca1P41233 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.37■□□□□ 0.37
Abca1P41233 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Abca1P41233 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Abca1P41233 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Abca1P41233 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Abca1P41233 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Abca1P41233 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Abca1P41233 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Abca1P41233 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Abca1P41233 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Abca1P41233 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.37■□□□□ 0.37
Abca1P41233 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Abca1P41233 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Abca1P41233 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Abca1P41233 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Abca1P41233 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Abca1P41233 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Abca1P41233 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Abca1P41233 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Abca1P41233 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Abca1P41233 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Abca1P41233 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Abca1P41233 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Abca1P41233 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Abca1P41233 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms