Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rc3h2P0C090 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rc3h2P0C090 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.6■■□□□ 1.05
Rc3h2P0C090 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Rc3h2P0C090 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rc3h2P0C090 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Rc3h2P0C090 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.6■■□□□ 1.05
Rc3h2P0C090 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rc3h2P0C090 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Rc3h2P0C090 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rc3h2P0C090 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.59■■□□□ 1.05
Rc3h2P0C090 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rc3h2P0C090 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rc3h2P0C090 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.59■■□□□ 1.05
Rc3h2P0C090 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rc3h2P0C090 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rc3h2P0C090 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.05
Rc3h2P0C090 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rc3h2P0C090 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rc3h2P0C090 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.58■■□□□ 1.05
Rc3h2P0C090 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.58■■□□□ 1.05
Rc3h2P0C090 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
Rc3h2P0C090 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Rc3h2P0C090 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
Rc3h2P0C090 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Rc3h2P0C090 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rc3h2P0C090 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rc3h2P0C090 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.57■■□□□ 1.04
Rc3h2P0C090 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Rc3h2P0C090 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.57■■□□□ 1.04
Rc3h2P0C090 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Rc3h2P0C090 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Rc3h2P0C090 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rc3h2P0C090 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Rc3h2P0C090 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rc3h2P0C090 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Rc3h2P0C090 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rc3h2P0C090 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rc3h2P0C090 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rc3h2P0C090 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rc3h2P0C090 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Rc3h2P0C090 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Rc3h2P0C090 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rc3h2P0C090 Gm12922-201ENSMUST00000120626 809 ntBASIC21.56■■□□□ 1.04
Rc3h2P0C090 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rc3h2P0C090 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rc3h2P0C090 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rc3h2P0C090 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rc3h2P0C090 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.55■■□□□ 1.04
Rc3h2P0C090 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rc3h2P0C090 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
Rc3h2P0C090 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rc3h2P0C090 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rc3h2P0C090 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rc3h2P0C090 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.54■■□□□ 1.04
Rc3h2P0C090 Gm21956-201ENSMUST00000179946 522 ntBASIC21.54■■□□□ 1.04
Rc3h2P0C090 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rc3h2P0C090 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Rc3h2P0C090 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Rc3h2P0C090 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rc3h2P0C090 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rc3h2P0C090 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rc3h2P0C090 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.53■■□□□ 1.04
Rc3h2P0C090 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rc3h2P0C090 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rc3h2P0C090 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rc3h2P0C090 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.53■■□□□ 1.04
Rc3h2P0C090 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rc3h2P0C090 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rc3h2P0C090 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rc3h2P0C090 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Rc3h2P0C090 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rc3h2P0C090 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rc3h2P0C090 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rc3h2P0C090 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Rc3h2P0C090 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.52■■□□□ 1.04
Rc3h2P0C090 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.52■■□□□ 1.04
Rc3h2P0C090 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rc3h2P0C090 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rc3h2P0C090 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rc3h2P0C090 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Rc3h2P0C090 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.52■■□□□ 1.03
Rc3h2P0C090 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.51■■□□□ 1.03
Rc3h2P0C090 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Rc3h2P0C090 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rc3h2P0C090 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rc3h2P0C090 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rc3h2P0C090 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.51■■□□□ 1.03
Rc3h2P0C090 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Rc3h2P0C090 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rc3h2P0C090 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rc3h2P0C090 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rc3h2P0C090 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rc3h2P0C090 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.5■■□□□ 1.03
Rc3h2P0C090 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.5■■□□□ 1.03
Rc3h2P0C090 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rc3h2P0C090 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
Rc3h2P0C090 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rc3h2P0C090 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.49■■□□□ 1.03
Rc3h2P0C090 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms