Protein–RNA interactions for Protein: P06728

Apoa4, Apolipoprotein A-IV, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoa4P06728 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.77■□□□□ 0.92
Apoa4P06728 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Apoa4P06728 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Apoa4P06728 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Apoa4P06728 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Apoa4P06728 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Apoa4P06728 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Apoa4P06728 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Apoa4P06728 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Apoa4P06728 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Apoa4P06728 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Apoa4P06728 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Apoa4P06728 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Apoa4P06728 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Apoa4P06728 Gm14523-201ENSMUST00000117260 558 ntBASIC20.75■□□□□ 0.91
Apoa4P06728 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.75■□□□□ 0.91
Apoa4P06728 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.75■□□□□ 0.91
Apoa4P06728 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Apoa4P06728 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Apoa4P06728 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Apoa4P06728 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Apoa4P06728 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Apoa4P06728 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Apoa4P06728 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Apoa4P06728 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Apoa4P06728 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Apoa4P06728 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Apoa4P06728 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Apoa4P06728 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.73■□□□□ 0.91
Apoa4P06728 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Apoa4P06728 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Apoa4P06728 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.73■□□□□ 0.91
Apoa4P06728 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Apoa4P06728 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Apoa4P06728 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Apoa4P06728 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Apoa4P06728 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Apoa4P06728 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Apoa4P06728 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Apoa4P06728 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Apoa4P06728 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Apoa4P06728 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.71■□□□□ 0.91
Apoa4P06728 Gm27502-201ENSMUST00000183495 199 ntBASIC20.71■□□□□ 0.91
Apoa4P06728 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Apoa4P06728 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Apoa4P06728 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Apoa4P06728 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Apoa4P06728 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Apoa4P06728 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Apoa4P06728 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Apoa4P06728 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Apoa4P06728 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Apoa4P06728 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Apoa4P06728 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Apoa4P06728 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Apoa4P06728 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Apoa4P06728 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.7■□□□□ 0.9
Apoa4P06728 Gm7332-201ENSMUST00000118351 454 ntBASIC20.7■□□□□ 0.9
Apoa4P06728 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Apoa4P06728 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Apoa4P06728 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Apoa4P06728 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Apoa4P06728 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Apoa4P06728 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Apoa4P06728 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Apoa4P06728 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Apoa4P06728 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Apoa4P06728 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Apoa4P06728 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Apoa4P06728 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Apoa4P06728 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.68■□□□□ 0.9
Apoa4P06728 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Apoa4P06728 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.68■□□□□ 0.9
Apoa4P06728 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Apoa4P06728 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Apoa4P06728 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Apoa4P06728 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Apoa4P06728 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Apoa4P06728 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Apoa4P06728 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Apoa4P06728 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Apoa4P06728 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Apoa4P06728 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Apoa4P06728 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Apoa4P06728 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.66■□□□□ 0.9
Apoa4P06728 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Apoa4P06728 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Apoa4P06728 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Apoa4P06728 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Apoa4P06728 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Apoa4P06728 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Apoa4P06728 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Apoa4P06728 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Apoa4P06728 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Apoa4P06728 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.65■□□□□ 0.9
Apoa4P06728 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Apoa4P06728 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Apoa4P06728 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Apoa4P06728 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.64■□□□□ 0.9
Apoa4P06728 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 150.2 ms