Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Cops4O88544 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cops4O88544 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cops4O88544 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Cops4O88544 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cops4O88544 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cops4O88544 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cops4O88544 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cops4O88544 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cops4O88544 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Cops4O88544 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cops4O88544 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cops4O88544 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cops4O88544 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cops4O88544 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.43■□□□□ 0.7
Cops4O88544 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cops4O88544 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cops4O88544 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Cops4O88544 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cops4O88544 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Cops4O88544 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Cops4O88544 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cops4O88544 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Cops4O88544 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cops4O88544 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cops4O88544 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cops4O88544 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.41■□□□□ 0.7
Cops4O88544 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cops4O88544 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cops4O88544 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cops4O88544 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cops4O88544 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cops4O88544 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Cops4O88544 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cops4O88544 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cops4O88544 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cops4O88544 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Cops4O88544 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cops4O88544 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cops4O88544 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.4■□□□□ 0.7
Cops4O88544 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cops4O88544 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Cops4O88544 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cops4O88544 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.39■□□□□ 0.7
Cops4O88544 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.39■□□□□ 0.69
Cops4O88544 Gm6311-201ENSMUST00000073790 878 ntBASIC19.39■□□□□ 0.69
Cops4O88544 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.39■□□□□ 0.69
Cops4O88544 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cops4O88544 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cops4O88544 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cops4O88544 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cops4O88544 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cops4O88544 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cops4O88544 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cops4O88544 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Cops4O88544 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
Cops4O88544 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.38■□□□□ 0.69
Cops4O88544 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.38■□□□□ 0.69
Cops4O88544 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Cops4O88544 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cops4O88544 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Cops4O88544 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cops4O88544 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cops4O88544 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cops4O88544 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.37■□□□□ 0.69
Cops4O88544 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cops4O88544 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cops4O88544 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cops4O88544 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cops4O88544 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cops4O88544 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cops4O88544 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cops4O88544 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cops4O88544 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cops4O88544 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cops4O88544 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cops4O88544 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.35■□□□□ 0.69
Cops4O88544 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.35■□□□□ 0.69
Cops4O88544 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.35■□□□□ 0.69
Cops4O88544 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.35■□□□□ 0.69
Cops4O88544 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cops4O88544 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cops4O88544 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cops4O88544 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cops4O88544 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cops4O88544 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cops4O88544 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cops4O88544 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cops4O88544 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cops4O88544 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cops4O88544 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cops4O88544 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cops4O88544 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cops4O88544 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.33■□□□□ 0.68
Cops4O88544 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cops4O88544 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cops4O88544 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cops4O88544 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cops4O88544 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cops4O88544 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms