Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Kcnu1O54982 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC22.61■■□□□ 1.21
Kcnu1O54982 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Kcnu1O54982 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Kcnu1O54982 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Kcnu1O54982 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC22.6■■□□□ 1.21
Kcnu1O54982 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Kcnu1O54982 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Kcnu1O54982 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Kcnu1O54982 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Kcnu1O54982 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC22.6■■□□□ 1.21
Kcnu1O54982 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Kcnu1O54982 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Kcnu1O54982 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Kcnu1O54982 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.59■■□□□ 1.21
Kcnu1O54982 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Kcnu1O54982 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Kcnu1O54982 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Kcnu1O54982 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Kcnu1O54982 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Kcnu1O54982 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC22.59■■□□□ 1.21
Kcnu1O54982 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Kcnu1O54982 AC158990.1-201ENSMUST00000221450 2016 ntBASIC22.58■■□□□ 1.21
Kcnu1O54982 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Kcnu1O54982 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Kcnu1O54982 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Kcnu1O54982 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC22.58■■□□□ 1.21
Kcnu1O54982 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Kcnu1O54982 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC22.58■■□□□ 1.2
Kcnu1O54982 Gm43403-201ENSMUST00000198011 1786 ntBASIC22.58■■□□□ 1.2
Kcnu1O54982 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Kcnu1O54982 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Kcnu1O54982 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Kcnu1O54982 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Kcnu1O54982 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Kcnu1O54982 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Kcnu1O54982 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Kcnu1O54982 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Kcnu1O54982 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Kcnu1O54982 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Kcnu1O54982 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Kcnu1O54982 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Kcnu1O54982 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Kcnu1O54982 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Kcnu1O54982 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
Kcnu1O54982 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Kcnu1O54982 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Kcnu1O54982 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Kcnu1O54982 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC22.55■■□□□ 1.2
Kcnu1O54982 Cap2-205ENSMUST00000225824 1634 ntBASIC22.55■■□□□ 1.2
Kcnu1O54982 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC22.55■■□□□ 1.2
Kcnu1O54982 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Kcnu1O54982 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Kcnu1O54982 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Kcnu1O54982 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
Kcnu1O54982 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Kcnu1O54982 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC22.54■■□□□ 1.2
Kcnu1O54982 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Kcnu1O54982 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Kcnu1O54982 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Kcnu1O54982 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Kcnu1O54982 Gm5067-201ENSMUST00000170449 1009 ntBASIC22.53■■□□□ 1.2
Kcnu1O54982 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Kcnu1O54982 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Kcnu1O54982 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Kcnu1O54982 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Kcnu1O54982 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC22.52■■□□□ 1.2
Kcnu1O54982 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Kcnu1O54982 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Kcnu1O54982 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Kcnu1O54982 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Kcnu1O54982 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Kcnu1O54982 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC22.52■■□□□ 1.19
Kcnu1O54982 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Kcnu1O54982 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Kcnu1O54982 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Kcnu1O54982 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Kcnu1O54982 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Kcnu1O54982 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Kcnu1O54982 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Kcnu1O54982 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC22.5■■□□□ 1.19
Kcnu1O54982 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Kcnu1O54982 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Kcnu1O54982 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Kcnu1O54982 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Kcnu1O54982 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Kcnu1O54982 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Kcnu1O54982 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Kcnu1O54982 Kdm3b-204ENSMUST00000224715 2032 ntBASIC22.49■■□□□ 1.19
Kcnu1O54982 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Kcnu1O54982 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Kcnu1O54982 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Kcnu1O54982 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Kcnu1O54982 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Kcnu1O54982 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Kcnu1O54982 AC164883.3-201ENSMUST00000227396 1774 ntBASIC22.48■■□□□ 1.19
Kcnu1O54982 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC22.48■■□□□ 1.19
Kcnu1O54982 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Kcnu1O54982 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Kcnu1O54982 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms