Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Kcnu1O54982 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC22.61■■□□□ 1.21
Kcnu1O54982 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Kcnu1O54982 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Kcnu1O54982 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Kcnu1O54982 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC22.6■■□□□ 1.21
Kcnu1O54982 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Kcnu1O54982 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Kcnu1O54982 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Kcnu1O54982 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Kcnu1O54982 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC22.6■■□□□ 1.21
Kcnu1O54982 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Kcnu1O54982 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Kcnu1O54982 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Kcnu1O54982 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.59■■□□□ 1.21
Kcnu1O54982 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Kcnu1O54982 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Kcnu1O54982 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Kcnu1O54982 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Kcnu1O54982 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Kcnu1O54982 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC22.59■■□□□ 1.21
Kcnu1O54982 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Kcnu1O54982 AC158990.1-201ENSMUST00000221450 2016 ntBASIC22.58■■□□□ 1.21
Kcnu1O54982 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Kcnu1O54982 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Kcnu1O54982 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Kcnu1O54982 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC22.58■■□□□ 1.21
Kcnu1O54982 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Kcnu1O54982 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC22.58■■□□□ 1.2
Kcnu1O54982 Gm43403-201ENSMUST00000198011 1786 ntBASIC22.58■■□□□ 1.2
Kcnu1O54982 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Kcnu1O54982 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Kcnu1O54982 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Kcnu1O54982 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Kcnu1O54982 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Kcnu1O54982 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Kcnu1O54982 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Kcnu1O54982 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Kcnu1O54982 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Kcnu1O54982 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Kcnu1O54982 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Kcnu1O54982 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Kcnu1O54982 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Kcnu1O54982 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Kcnu1O54982 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
Kcnu1O54982 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Kcnu1O54982 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Kcnu1O54982 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Kcnu1O54982 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC22.55■■□□□ 1.2
Kcnu1O54982 Cap2-205ENSMUST00000225824 1634 ntBASIC22.55■■□□□ 1.2
Kcnu1O54982 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC22.55■■□□□ 1.2
Kcnu1O54982 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Kcnu1O54982 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Kcnu1O54982 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Kcnu1O54982 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
Kcnu1O54982 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Kcnu1O54982 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC22.54■■□□□ 1.2
Kcnu1O54982 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Kcnu1O54982 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Kcnu1O54982 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Kcnu1O54982 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Kcnu1O54982 Gm5067-201ENSMUST00000170449 1009 ntBASIC22.53■■□□□ 1.2
Kcnu1O54982 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Kcnu1O54982 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Kcnu1O54982 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Kcnu1O54982 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Kcnu1O54982 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC22.52■■□□□ 1.2
Kcnu1O54982 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Kcnu1O54982 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Kcnu1O54982 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Kcnu1O54982 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Kcnu1O54982 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Kcnu1O54982 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC22.52■■□□□ 1.19
Kcnu1O54982 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Kcnu1O54982 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Kcnu1O54982 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Kcnu1O54982 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Kcnu1O54982 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Kcnu1O54982 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Kcnu1O54982 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Kcnu1O54982 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC22.5■■□□□ 1.19
Kcnu1O54982 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Kcnu1O54982 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Kcnu1O54982 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Kcnu1O54982 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Kcnu1O54982 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Kcnu1O54982 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Kcnu1O54982 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Kcnu1O54982 Kdm3b-204ENSMUST00000224715 2032 ntBASIC22.49■■□□□ 1.19
Kcnu1O54982 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Kcnu1O54982 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Kcnu1O54982 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Kcnu1O54982 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Kcnu1O54982 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Kcnu1O54982 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Kcnu1O54982 AC164883.3-201ENSMUST00000227396 1774 ntBASIC22.48■■□□□ 1.19
Kcnu1O54982 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC22.48■■□□□ 1.19
Kcnu1O54982 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Kcnu1O54982 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Kcnu1O54982 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms