Protein–RNA interactions for Protein: O54907

Tnfsf12, Tumor necrosis factor ligand superfamily member 12, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf12O54907 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tnfsf12O54907 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfsf12O54907 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfsf12O54907 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfsf12O54907 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tnfsf12O54907 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tnfsf12O54907 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tnfsf12O54907 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Tnfsf12O54907 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfsf12O54907 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Tnfsf12O54907 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfsf12O54907 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.36
Tnfsf12O54907 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tnfsf12O54907 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfsf12O54907 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.32■□□□□ 0.36
Tnfsf12O54907 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfsf12O54907 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Tnfsf12O54907 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tnfsf12O54907 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.32■□□□□ 0.36
Tnfsf12O54907 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfsf12O54907 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfsf12O54907 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfsf12O54907 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Tnfsf12O54907 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.31■□□□□ 0.36
Tnfsf12O54907 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfsf12O54907 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tnfsf12O54907 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Tnfsf12O54907 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfsf12O54907 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfsf12O54907 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfsf12O54907 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.3■□□□□ 0.36
Tnfsf12O54907 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfsf12O54907 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.3■□□□□ 0.36
Tnfsf12O54907 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.3■□□□□ 0.36
Tnfsf12O54907 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tnfsf12O54907 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Tnfsf12O54907 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfsf12O54907 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfsf12O54907 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfsf12O54907 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.29■□□□□ 0.36
Tnfsf12O54907 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tnfsf12O54907 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfsf12O54907 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfsf12O54907 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfsf12O54907 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfsf12O54907 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfsf12O54907 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Tnfsf12O54907 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tnfsf12O54907 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.28■□□□□ 0.36
Tnfsf12O54907 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Tnfsf12O54907 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Tnfsf12O54907 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Tnfsf12O54907 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Tnfsf12O54907 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Tnfsf12O54907 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tnfsf12O54907 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tnfsf12O54907 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tnfsf12O54907 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tnfsf12O54907 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tnfsf12O54907 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tnfsf12O54907 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfsf12O54907 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfsf12O54907 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfsf12O54907 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfsf12O54907 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfsf12O54907 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfsf12O54907 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.26■□□□□ 0.35
Tnfsf12O54907 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfsf12O54907 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.26■□□□□ 0.35
Tnfsf12O54907 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Tnfsf12O54907 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.26■□□□□ 0.35
Tnfsf12O54907 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfsf12O54907 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tnfsf12O54907 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.26■□□□□ 0.35
Tnfsf12O54907 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfsf12O54907 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfsf12O54907 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Tnfsf12O54907 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfsf12O54907 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfsf12O54907 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfsf12O54907 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfsf12O54907 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tnfsf12O54907 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Tnfsf12O54907 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.24■□□□□ 0.35
Tnfsf12O54907 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfsf12O54907 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfsf12O54907 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfsf12O54907 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Tnfsf12O54907 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Tnfsf12O54907 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tnfsf12O54907 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfsf12O54907 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.23■□□□□ 0.35
Tnfsf12O54907 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfsf12O54907 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfsf12O54907 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.23■□□□□ 0.35
Tnfsf12O54907 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfsf12O54907 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfsf12O54907 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Tnfsf12O54907 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Tnfsf12O54907 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms