Protein–RNA interactions for Protein: O35228

Ebi3, Interleukin-27 subunit beta, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebi3O35228 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
Ebi3O35228 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ebi3O35228 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Ebi3O35228 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ebi3O35228 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ebi3O35228 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ebi3O35228 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ebi3O35228 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ebi3O35228 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC16.26■□□□□ 0.19
Ebi3O35228 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Ebi3O35228 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ebi3O35228 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ebi3O35228 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ebi3O35228 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ebi3O35228 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ebi3O35228 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ebi3O35228 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Ebi3O35228 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ebi3O35228 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ebi3O35228 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ebi3O35228 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ebi3O35228 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ebi3O35228 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ebi3O35228 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ebi3O35228 Gm10420-201ENSMUST00000121713 882 ntBASIC16.24■□□□□ 0.19
Ebi3O35228 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ebi3O35228 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ebi3O35228 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC16.24■□□□□ 0.19
Ebi3O35228 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ebi3O35228 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ebi3O35228 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
Ebi3O35228 AC164883.3-201ENSMUST00000227396 1774 ntBASIC16.23■□□□□ 0.19
Ebi3O35228 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ebi3O35228 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ebi3O35228 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ebi3O35228 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ebi3O35228 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ebi3O35228 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ebi3O35228 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ebi3O35228 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ebi3O35228 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ebi3O35228 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ebi3O35228 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC16.22■□□□□ 0.19
Ebi3O35228 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ebi3O35228 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ebi3O35228 Gm38160-201ENSMUST00000193090 2499 ntBASIC16.22■□□□□ 0.19
Ebi3O35228 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ebi3O35228 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ebi3O35228 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC16.22■□□□□ 0.19
Ebi3O35228 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ebi3O35228 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ebi3O35228 Gm43006-201ENSMUST00000197702 1602 ntBASIC16.22■□□□□ 0.19
Ebi3O35228 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ebi3O35228 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ebi3O35228 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ebi3O35228 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC16.21■□□□□ 0.19
Ebi3O35228 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Ebi3O35228 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ebi3O35228 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ebi3O35228 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ebi3O35228 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ebi3O35228 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ebi3O35228 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ebi3O35228 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ebi3O35228 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ebi3O35228 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Ebi3O35228 AC116713.1-201ENSMUST00000215074 430 ntBASIC16.2■□□□□ 0.18
Ebi3O35228 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Ebi3O35228 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC16.2■□□□□ 0.18
Ebi3O35228 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ebi3O35228 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ebi3O35228 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ebi3O35228 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ebi3O35228 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC16.19■□□□□ 0.18
Ebi3O35228 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Ebi3O35228 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ebi3O35228 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ebi3O35228 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ebi3O35228 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Ebi3O35228 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ebi3O35228 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ebi3O35228 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ebi3O35228 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ebi3O35228 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC16.18■□□□□ 0.18
Ebi3O35228 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ebi3O35228 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ebi3O35228 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ebi3O35228 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ebi3O35228 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ebi3O35228 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Ebi3O35228 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ebi3O35228 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ebi3O35228 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Ebi3O35228 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC16.17■□□□□ 0.18
Ebi3O35228 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ebi3O35228 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC16.17■□□□□ 0.18
Ebi3O35228 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
Ebi3O35228 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC16.17■□□□□ 0.18
Ebi3O35228 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ebi3O35228 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms