Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm12887B1AVM1 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm12887B1AVM1 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm12887B1AVM1 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm12887B1AVM1 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm12887B1AVM1 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.1■□□□□ 0.33
Gm12887B1AVM1 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm12887B1AVM1 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Gm12887B1AVM1 AC131739.1-201ENSMUST00000221692 1245 ntBASIC17.1■□□□□ 0.33
Gm12887B1AVM1 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm12887B1AVM1 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm12887B1AVM1 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm12887B1AVM1 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm12887B1AVM1 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm12887B1AVM1 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC17.09■□□□□ 0.33
Gm12887B1AVM1 Terc-201ENSMUST00000082862 423 ntBASIC17.09■□□□□ 0.33
Gm12887B1AVM1 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.09■□□□□ 0.33
Gm12887B1AVM1 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm12887B1AVM1 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.08■□□□□ 0.33
Gm12887B1AVM1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm12887B1AVM1 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.08■□□□□ 0.33
Gm12887B1AVM1 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm12887B1AVM1 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Gm12887B1AVM1 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm12887B1AVM1 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm12887B1AVM1 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm12887B1AVM1 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm12887B1AVM1 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm12887B1AVM1 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Gm12887B1AVM1 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm12887B1AVM1 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm12887B1AVM1 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm12887B1AVM1 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm12887B1AVM1 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm12887B1AVM1 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm12887B1AVM1 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm12887B1AVM1 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm12887B1AVM1 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm12887B1AVM1 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm12887B1AVM1 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm12887B1AVM1 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC17.06■□□□□ 0.32
Gm12887B1AVM1 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.06■□□□□ 0.32
Gm12887B1AVM1 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Gm12887B1AVM1 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm12887B1AVM1 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gm12887B1AVM1 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gm12887B1AVM1 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Gm12887B1AVM1 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm12887B1AVM1 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm12887B1AVM1 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm12887B1AVM1 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gm12887B1AVM1 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC17.05■□□□□ 0.32
Gm12887B1AVM1 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.05■□□□□ 0.32
Gm12887B1AVM1 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Gm12887B1AVM1 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gm12887B1AVM1 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.05■□□□□ 0.32
Gm12887B1AVM1 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gm12887B1AVM1 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Gm12887B1AVM1 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm12887B1AVM1 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm12887B1AVM1 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm12887B1AVM1 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm12887B1AVM1 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm12887B1AVM1 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Gm12887B1AVM1 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Gm12887B1AVM1 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.03■□□□□ 0.32
Gm12887B1AVM1 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm12887B1AVM1 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm12887B1AVM1 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC17.03■□□□□ 0.32
Gm12887B1AVM1 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC17.03■□□□□ 0.32
Gm12887B1AVM1 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm12887B1AVM1 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm12887B1AVM1 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm12887B1AVM1 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm12887B1AVM1 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm12887B1AVM1 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Gm12887B1AVM1 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Gm12887B1AVM1 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Gm12887B1AVM1 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Gm12887B1AVM1 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm12887B1AVM1 Gm12818-201ENSMUST00000117562 1349 ntBASIC17.01■□□□□ 0.31
Gm12887B1AVM1 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Gm12887B1AVM1 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Gm12887B1AVM1 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC17.01■□□□□ 0.31
Gm12887B1AVM1 Mir3960-201ENSMUST00000198213 73 ntBASIC17.01■□□□□ 0.31
Gm12887B1AVM1 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.01■□□□□ 0.31
Gm12887B1AVM1 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm12887B1AVM1 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Gm12887B1AVM1 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm12887B1AVM1 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm12887B1AVM1 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17■□□□□ 0.31
Gm12887B1AVM1 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Gm12887B1AVM1 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm12887B1AVM1 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Gm12887B1AVM1 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Gm12887B1AVM1 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Gm12887B1AVM1 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC16.99■□□□□ 0.31
Gm12887B1AVM1 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC16.99■□□□□ 0.31
Gm12887B1AVM1 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm12887B1AVM1 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms