Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.32■■□□□ 1
Gm3854A0A1B0GSS6 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.32■■□□□ 1
Gm3854A0A1B0GSS6 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.32■■□□□ 1
Gm3854A0A1B0GSS6 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Gm3854A0A1B0GSS6 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Gm3854A0A1B0GSS6 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gm3854A0A1B0GSS6 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.31■■□□□ 1
Gm3854A0A1B0GSS6 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gm3854A0A1B0GSS6 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.31■■□□□ 1
Gm3854A0A1B0GSS6 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC21.31■■□□□ 1
Gm3854A0A1B0GSS6 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.31■■□□□ 1
Gm3854A0A1B0GSS6 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.31■■□□□ 1
Gm3854A0A1B0GSS6 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gm3854A0A1B0GSS6 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gm3854A0A1B0GSS6 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.31■■□□□ 1
Gm3854A0A1B0GSS6 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.3■■□□□ 1
Gm3854A0A1B0GSS6 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.3■■□□□ 1
Gm3854A0A1B0GSS6 Serp2-204ENSMUST00000228055 705 ntBASIC21.3■■□□□ 1
Gm3854A0A1B0GSS6 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.3■■□□□ 1
Gm3854A0A1B0GSS6 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm3854A0A1B0GSS6 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.29■■□□□ 1
Gm3854A0A1B0GSS6 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.29■■□□□ 1
Gm3854A0A1B0GSS6 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm3854A0A1B0GSS6 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.29■■□□□ 1
Gm3854A0A1B0GSS6 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Gm3854A0A1B0GSS6 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm3854A0A1B0GSS6 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm3854A0A1B0GSS6 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.28■■□□□ 1
Gm3854A0A1B0GSS6 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Gm3854A0A1B0GSS6 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Gm3854A0A1B0GSS6 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm3854A0A1B0GSS6 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Gm3854A0A1B0GSS6 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Gm3854A0A1B0GSS6 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm3854A0A1B0GSS6 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm3854A0A1B0GSS6 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.27■■□□□ 1
Gm3854A0A1B0GSS6 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Gm3854A0A1B0GSS6 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm3854A0A1B0GSS6 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Gm3854A0A1B0GSS6 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Gm3854A0A1B0GSS6 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.27■□□□□ 0.99
Gm3854A0A1B0GSS6 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm3854A0A1B0GSS6 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Gm3854A0A1B0GSS6 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
Gm3854A0A1B0GSS6 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.25■□□□□ 0.99
Gm3854A0A1B0GSS6 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm3854A0A1B0GSS6 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gm3854A0A1B0GSS6 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.24■□□□□ 0.99
Gm3854A0A1B0GSS6 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm3854A0A1B0GSS6 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm3854A0A1B0GSS6 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Gm3854A0A1B0GSS6 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm3854A0A1B0GSS6 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm3854A0A1B0GSS6 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm3854A0A1B0GSS6 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm3854A0A1B0GSS6 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm3854A0A1B0GSS6 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Gm3854A0A1B0GSS6 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.23■□□□□ 0.99
Gm3854A0A1B0GSS6 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Gm3854A0A1B0GSS6 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm3854A0A1B0GSS6 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Gm3854A0A1B0GSS6 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Gm3854A0A1B0GSS6 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm3854A0A1B0GSS6 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm3854A0A1B0GSS6 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Gm3854A0A1B0GSS6 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm3854A0A1B0GSS6 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm3854A0A1B0GSS6 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Gm3854A0A1B0GSS6 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Gm3854A0A1B0GSS6 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.21■□□□□ 0.99
Gm3854A0A1B0GSS6 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm3854A0A1B0GSS6 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm3854A0A1B0GSS6 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Gm3854A0A1B0GSS6 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Gm3854A0A1B0GSS6 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Gm3854A0A1B0GSS6 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.2■□□□□ 0.98
Gm3854A0A1B0GSS6 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm3854A0A1B0GSS6 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.2■□□□□ 0.98
Gm3854A0A1B0GSS6 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm3854A0A1B0GSS6 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm3854A0A1B0GSS6 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm3854A0A1B0GSS6 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm3854A0A1B0GSS6 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm3854A0A1B0GSS6 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Gm3854A0A1B0GSS6 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Gm3854A0A1B0GSS6 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm3854A0A1B0GSS6 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
Gm3854A0A1B0GSS6 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm3854A0A1B0GSS6 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm3854A0A1B0GSS6 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm3854A0A1B0GSS6 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm3854A0A1B0GSS6 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm3854A0A1B0GSS6 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm3854A0A1B0GSS6 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm3854A0A1B0GSS6 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm3854A0A1B0GSS6 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm3854A0A1B0GSS6 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm3854A0A1B0GSS6 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm3854A0A1B0GSS6 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Gm3854A0A1B0GSS6 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms