Protein–RNA interactions for Protein: A0A0A6YX66

Ighv1-20, Immunoglobulin heavy variable V1-20 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-20A0A0A6YX66 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-20A0A0A6YX66 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-20A0A0A6YX66 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-20A0A0A6YX66 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-20A0A0A6YX66 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-20A0A0A6YX66 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-20A0A0A6YX66 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-20A0A0A6YX66 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-20A0A0A6YX66 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-20A0A0A6YX66 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-20A0A0A6YX66 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-20A0A0A6YX66 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-20A0A0A6YX66 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-20A0A0A6YX66 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-20A0A0A6YX66 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-20A0A0A6YX66 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.11■□□□□ 0.33
Ighv1-20A0A0A6YX66 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-20A0A0A6YX66 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Ighv1-20A0A0A6YX66 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-20A0A0A6YX66 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-20A0A0A6YX66 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-20A0A0A6YX66 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-20A0A0A6YX66 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ighv1-20A0A0A6YX66 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Ighv1-20A0A0A6YX66 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
Ighv1-20A0A0A6YX66 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ighv1-20A0A0A6YX66 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ighv1-20A0A0A6YX66 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.1■□□□□ 0.33
Ighv1-20A0A0A6YX66 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-20A0A0A6YX66 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-20A0A0A6YX66 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Ighv1-20A0A0A6YX66 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-20A0A0A6YX66 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.1■□□□□ 0.33
Ighv1-20A0A0A6YX66 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-20A0A0A6YX66 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-20A0A0A6YX66 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Ighv1-20A0A0A6YX66 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ighv1-20A0A0A6YX66 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ighv1-20A0A0A6YX66 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv1-20A0A0A6YX66 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.08■□□□□ 0.32
Ighv1-20A0A0A6YX66 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv1-20A0A0A6YX66 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv1-20A0A0A6YX66 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv1-20A0A0A6YX66 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.08■□□□□ 0.32
Ighv1-20A0A0A6YX66 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.08■□□□□ 0.32
Ighv1-20A0A0A6YX66 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv1-20A0A0A6YX66 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv1-20A0A0A6YX66 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv1-20A0A0A6YX66 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-20A0A0A6YX66 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-20A0A0A6YX66 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ighv1-20A0A0A6YX66 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-20A0A0A6YX66 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-20A0A0A6YX66 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Ighv1-20A0A0A6YX66 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-20A0A0A6YX66 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ighv1-20A0A0A6YX66 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ighv1-20A0A0A6YX66 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ighv1-20A0A0A6YX66 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.06■□□□□ 0.32
Ighv1-20A0A0A6YX66 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-20A0A0A6YX66 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-20A0A0A6YX66 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-20A0A0A6YX66 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.05■□□□□ 0.32
Ighv1-20A0A0A6YX66 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-20A0A0A6YX66 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-20A0A0A6YX66 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.05■□□□□ 0.32
Ighv1-20A0A0A6YX66 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.05■□□□□ 0.32
Ighv1-20A0A0A6YX66 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-20A0A0A6YX66 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.05■□□□□ 0.32
Ighv1-20A0A0A6YX66 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.05■□□□□ 0.32
Ighv1-20A0A0A6YX66 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-20A0A0A6YX66 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.05■□□□□ 0.32
Ighv1-20A0A0A6YX66 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv1-20A0A0A6YX66 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.04■□□□□ 0.32
Ighv1-20A0A0A6YX66 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv1-20A0A0A6YX66 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.04■□□□□ 0.32
Ighv1-20A0A0A6YX66 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Ighv1-20A0A0A6YX66 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Ighv1-20A0A0A6YX66 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ighv1-20A0A0A6YX66 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ighv1-20A0A0A6YX66 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-20A0A0A6YX66 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-20A0A0A6YX66 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-20A0A0A6YX66 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.03■□□□□ 0.32
Ighv1-20A0A0A6YX66 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-20A0A0A6YX66 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-20A0A0A6YX66 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-20A0A0A6YX66 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-20A0A0A6YX66 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.03■□□□□ 0.32
Ighv1-20A0A0A6YX66 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-20A0A0A6YX66 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-20A0A0A6YX66 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-20A0A0A6YX66 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-20A0A0A6YX66 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-20A0A0A6YX66 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-20A0A0A6YX66 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Ighv1-20A0A0A6YX66 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-20A0A0A6YX66 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-20A0A0A6YX66 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.02■□□□□ 0.32
Ighv1-20A0A0A6YX66 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms