Protein–RNA interactions for Protein: A0A0A6YWI9

Ighv1-11, Immunoglobulin heavy variable V1-11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-11A0A0A6YWI9 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ighv1-11A0A0A6YWI9 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ighv1-11A0A0A6YWI9 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
Ighv1-11A0A0A6YWI9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ighv1-11A0A0A6YWI9 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ighv1-11A0A0A6YWI9 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC14.92□□□□□ -0.02
Ighv1-11A0A0A6YWI9 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Ighv1-11A0A0A6YWI9 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ighv1-11A0A0A6YWI9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ighv1-11A0A0A6YWI9 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC14.92□□□□□ -0.02
Ighv1-11A0A0A6YWI9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ighv1-11A0A0A6YWI9 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Ighv1-11A0A0A6YWI9 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ighv1-11A0A0A6YWI9 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ighv1-11A0A0A6YWI9 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ighv1-11A0A0A6YWI9 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ighv1-11A0A0A6YWI9 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ighv1-11A0A0A6YWI9 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ighv1-11A0A0A6YWI9 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ighv1-11A0A0A6YWI9 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC14.91□□□□□ -0.02
Ighv1-11A0A0A6YWI9 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Ighv1-11A0A0A6YWI9 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ighv1-11A0A0A6YWI9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ighv1-11A0A0A6YWI9 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ighv1-11A0A0A6YWI9 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv1-11A0A0A6YWI9 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv1-11A0A0A6YWI9 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv1-11A0A0A6YWI9 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv1-11A0A0A6YWI9 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Ighv1-11A0A0A6YWI9 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv1-11A0A0A6YWI9 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Ighv1-11A0A0A6YWI9 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Gm5987-201ENSMUST00000196433 1151 ntBASIC14.89□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv1-11A0A0A6YWI9 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC14.89□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-11A0A0A6YWI9 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Hsf1-207ENSMUST00000228371 2102 ntBASIC14.86□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC14.86□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC14.86□□□□□ -0.03
Ighv1-11A0A0A6YWI9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC14.86□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC14.85□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC14.85□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Ighv1-11A0A0A6YWI9 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ighv1-11A0A0A6YWI9 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ighv1-11A0A0A6YWI9 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ighv1-11A0A0A6YWI9 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms