Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav9d-1A0A075B699 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trav9d-1A0A075B699 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav9d-1A0A075B699 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trav9d-1A0A075B699 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav9d-1A0A075B699 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav9d-1A0A075B699 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav9d-1A0A075B699 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC16.28■□□□□ 0.2
Trav9d-1A0A075B699 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav9d-1A0A075B699 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav9d-1A0A075B699 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trav9d-1A0A075B699 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav9d-1A0A075B699 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav9d-1A0A075B699 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav9d-1A0A075B699 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav9d-1A0A075B699 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trav9d-1A0A075B699 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trav9d-1A0A075B699 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav9d-1A0A075B699 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC16.28■□□□□ 0.2
Trav9d-1A0A075B699 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav9d-1A0A075B699 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav9d-1A0A075B699 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav9d-1A0A075B699 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav9d-1A0A075B699 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav9d-1A0A075B699 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav9d-1A0A075B699 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav9d-1A0A075B699 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav9d-1A0A075B699 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav9d-1A0A075B699 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav9d-1A0A075B699 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav9d-1A0A075B699 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Trav9d-1A0A075B699 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav9d-1A0A075B699 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav9d-1A0A075B699 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC16.26■□□□□ 0.19
Trav9d-1A0A075B699 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trav9d-1A0A075B699 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav9d-1A0A075B699 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav9d-1A0A075B699 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav9d-1A0A075B699 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav9d-1A0A075B699 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav9d-1A0A075B699 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav9d-1A0A075B699 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav9d-1A0A075B699 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav9d-1A0A075B699 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav9d-1A0A075B699 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav9d-1A0A075B699 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav9d-1A0A075B699 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav9d-1A0A075B699 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav9d-1A0A075B699 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav9d-1A0A075B699 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Trav9d-1A0A075B699 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav9d-1A0A075B699 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav9d-1A0A075B699 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Trav9d-1A0A075B699 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav9d-1A0A075B699 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trav9d-1A0A075B699 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC16.24■□□□□ 0.19
Trav9d-1A0A075B699 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav9d-1A0A075B699 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav9d-1A0A075B699 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav9d-1A0A075B699 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav9d-1A0A075B699 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav9d-1A0A075B699 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav9d-1A0A075B699 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav9d-1A0A075B699 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav9d-1A0A075B699 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC16.23■□□□□ 0.19
Trav9d-1A0A075B699 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trav9d-1A0A075B699 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav9d-1A0A075B699 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav9d-1A0A075B699 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC16.22■□□□□ 0.19
Trav9d-1A0A075B699 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav9d-1A0A075B699 Gm11175-201ENSMUST00000116172 543 ntBASIC16.22■□□□□ 0.19
Trav9d-1A0A075B699 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC16.22■□□□□ 0.19
Trav9d-1A0A075B699 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Trav9d-1A0A075B699 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav9d-1A0A075B699 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav9d-1A0A075B699 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav9d-1A0A075B699 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav9d-1A0A075B699 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav9d-1A0A075B699 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav9d-1A0A075B699 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav9d-1A0A075B699 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav9d-1A0A075B699 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav9d-1A0A075B699 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav9d-1A0A075B699 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav9d-1A0A075B699 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav9d-1A0A075B699 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Trav9d-1A0A075B699 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Trav9d-1A0A075B699 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC16.2■□□□□ 0.18
Trav9d-1A0A075B699 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav9d-1A0A075B699 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav9d-1A0A075B699 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav9d-1A0A075B699 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav9d-1A0A075B699 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav9d-1A0A075B699 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC16.18■□□□□ 0.18
Trav9d-1A0A075B699 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC16.18■□□□□ 0.18
Trav9d-1A0A075B699 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav9d-1A0A075B699 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav9d-1A0A075B699 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav9d-1A0A075B699 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav9d-1A0A075B699 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms