Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav4-4-dv10A0A075B651 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav4-4-dv10A0A075B651 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav4-4-dv10A0A075B651 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav4-4-dv10A0A075B651 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav4-4-dv10A0A075B651 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav4-4-dv10A0A075B651 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trav4-4-dv10A0A075B651 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav4-4-dv10A0A075B651 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav4-4-dv10A0A075B651 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav4-4-dv10A0A075B651 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav4-4-dv10A0A075B651 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav4-4-dv10A0A075B651 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav4-4-dv10A0A075B651 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trav4-4-dv10A0A075B651 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC16.5■□□□□ 0.23
Trav4-4-dv10A0A075B651 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav4-4-dv10A0A075B651 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav4-4-dv10A0A075B651 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trav4-4-dv10A0A075B651 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav4-4-dv10A0A075B651 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
Trav4-4-dv10A0A075B651 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Trav4-4-dv10A0A075B651 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav4-4-dv10A0A075B651 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav4-4-dv10A0A075B651 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav4-4-dv10A0A075B651 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav4-4-dv10A0A075B651 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Trav4-4-dv10A0A075B651 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav4-4-dv10A0A075B651 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trav4-4-dv10A0A075B651 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav4-4-dv10A0A075B651 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav4-4-dv10A0A075B651 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.48■□□□□ 0.23
Trav4-4-dv10A0A075B651 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav4-4-dv10A0A075B651 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav4-4-dv10A0A075B651 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav4-4-dv10A0A075B651 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
Trav4-4-dv10A0A075B651 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav4-4-dv10A0A075B651 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav4-4-dv10A0A075B651 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav4-4-dv10A0A075B651 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav4-4-dv10A0A075B651 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trav4-4-dv10A0A075B651 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav4-4-dv10A0A075B651 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC16.47■□□□□ 0.23
Trav4-4-dv10A0A075B651 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC16.47■□□□□ 0.23
Trav4-4-dv10A0A075B651 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav4-4-dv10A0A075B651 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav4-4-dv10A0A075B651 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav4-4-dv10A0A075B651 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav4-4-dv10A0A075B651 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav4-4-dv10A0A075B651 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav4-4-dv10A0A075B651 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC16.46■□□□□ 0.23
Trav4-4-dv10A0A075B651 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC16.46■□□□□ 0.23
Trav4-4-dv10A0A075B651 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav4-4-dv10A0A075B651 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav4-4-dv10A0A075B651 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav4-4-dv10A0A075B651 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
Trav4-4-dv10A0A075B651 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Trav4-4-dv10A0A075B651 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trav4-4-dv10A0A075B651 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.45■□□□□ 0.22
Trav4-4-dv10A0A075B651 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trav4-4-dv10A0A075B651 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav4-4-dv10A0A075B651 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav4-4-dv10A0A075B651 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
Trav4-4-dv10A0A075B651 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav4-4-dv10A0A075B651 AC164883.3-201ENSMUST00000227396 1774 ntBASIC16.45■□□□□ 0.22
Trav4-4-dv10A0A075B651 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav4-4-dv10A0A075B651 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC16.45■□□□□ 0.22
Trav4-4-dv10A0A075B651 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Trav4-4-dv10A0A075B651 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav4-4-dv10A0A075B651 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav4-4-dv10A0A075B651 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav4-4-dv10A0A075B651 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav4-4-dv10A0A075B651 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav4-4-dv10A0A075B651 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav4-4-dv10A0A075B651 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav4-4-dv10A0A075B651 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav4-4-dv10A0A075B651 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC16.43■□□□□ 0.22
Trav4-4-dv10A0A075B651 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav4-4-dv10A0A075B651 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav4-4-dv10A0A075B651 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav4-4-dv10A0A075B651 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav4-4-dv10A0A075B651 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC16.43■□□□□ 0.22
Trav4-4-dv10A0A075B651 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav4-4-dv10A0A075B651 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav4-4-dv10A0A075B651 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav4-4-dv10A0A075B651 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav4-4-dv10A0A075B651 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trav4-4-dv10A0A075B651 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav4-4-dv10A0A075B651 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Trav4-4-dv10A0A075B651 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav4-4-dv10A0A075B651 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav4-4-dv10A0A075B651 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav4-4-dv10A0A075B651 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC16.42■□□□□ 0.22
Trav4-4-dv10A0A075B651 Gm6311-201ENSMUST00000073790 878 ntBASIC16.42■□□□□ 0.22
Trav4-4-dv10A0A075B651 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC16.42■□□□□ 0.22
Trav4-4-dv10A0A075B651 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav4-4-dv10A0A075B651 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav4-4-dv10A0A075B651 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav4-4-dv10A0A075B651 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav4-4-dv10A0A075B651 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav4-4-dv10A0A075B651 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms