Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav6-6A0A075B603 Gm28731-201ENSMUST00000185564 1569 ntBASIC15.7■□□□□ 0.1
Trav6-6A0A075B603 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6-6A0A075B603 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6-6A0A075B603 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6-6A0A075B603 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6-6A0A075B603 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6-6A0A075B603 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6-6A0A075B603 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav6-6A0A075B603 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Trav6-6A0A075B603 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-6A0A075B603 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-6A0A075B603 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Trav6-6A0A075B603 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-6A0A075B603 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-6A0A075B603 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav6-6A0A075B603 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav6-6A0A075B603 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trav6-6A0A075B603 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Trav6-6A0A075B603 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6-6A0A075B603 Gm7199-201ENSMUST00000118327 1485 ntBASIC15.67■□□□□ 0.1
Trav6-6A0A075B603 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6-6A0A075B603 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav6-6A0A075B603 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trav6-6A0A075B603 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trav6-6A0A075B603 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC15.66■□□□□ 0.1
Trav6-6A0A075B603 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6-6A0A075B603 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC15.66■□□□□ 0.1
Trav6-6A0A075B603 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6-6A0A075B603 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trav6-6A0A075B603 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav6-6A0A075B603 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-6A0A075B603 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-6A0A075B603 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-6A0A075B603 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-6A0A075B603 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-6A0A075B603 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-6A0A075B603 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6-6A0A075B603 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC15.65■□□□□ 0.1
Trav6-6A0A075B603 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-6A0A075B603 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trav6-6A0A075B603 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-6A0A075B603 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC15.64■□□□□ 0.09
Trav6-6A0A075B603 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-6A0A075B603 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-6A0A075B603 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trav6-6A0A075B603 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6-6A0A075B603 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trav6-6A0A075B603 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-6A0A075B603 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-6A0A075B603 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC15.63■□□□□ 0.09
Trav6-6A0A075B603 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-6A0A075B603 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-6A0A075B603 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6-6A0A075B603 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Trav6-6A0A075B603 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Trav6-6A0A075B603 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6-6A0A075B603 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6-6A0A075B603 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6-6A0A075B603 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6-6A0A075B603 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
Trav6-6A0A075B603 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trav6-6A0A075B603 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6-6A0A075B603 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6-6A0A075B603 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6-6A0A075B603 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6-6A0A075B603 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trav6-6A0A075B603 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6-6A0A075B603 Gm22567-201ENSMUST00000175542 342 ntBASIC15.6■□□□□ 0.09
Trav6-6A0A075B603 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6-6A0A075B603 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6-6A0A075B603 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trav6-6A0A075B603 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6-6A0A075B603 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6-6A0A075B603 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6-6A0A075B603 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6-6A0A075B603 Golph3-202ENSMUST00000226517 2359 ntBASIC15.6■□□□□ 0.09
Trav6-6A0A075B603 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6-6A0A075B603 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6-6A0A075B603 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Trav6-6A0A075B603 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6-6A0A075B603 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6-6A0A075B603 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6-6A0A075B603 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6-6A0A075B603 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6-6A0A075B603 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC15.59■□□□□ 0.09
Trav6-6A0A075B603 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC15.59■□□□□ 0.09
Trav6-6A0A075B603 Gm6311-201ENSMUST00000073790 878 ntBASIC15.59■□□□□ 0.09
Trav6-6A0A075B603 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6-6A0A075B603 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC15.59■□□□□ 0.09
Trav6-6A0A075B603 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6-6A0A075B603 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6-6A0A075B603 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6-6A0A075B603 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav6-6A0A075B603 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav6-6A0A075B603 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Trav6-6A0A075B603 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
Trav6-6A0A075B603 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav6-6A0A075B603 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav6-6A0A075B603 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms