Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Trbv4A0A075B5I2 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.31■■□□□ 1
Trbv4A0A075B5I2 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trbv4A0A075B5I2 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trbv4A0A075B5I2 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trbv4A0A075B5I2 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Trbv4A0A075B5I2 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.3■■□□□ 1
Trbv4A0A075B5I2 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.3■■□□□ 1
Trbv4A0A075B5I2 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.3■■□□□ 1
Trbv4A0A075B5I2 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.3■■□□□ 1
Trbv4A0A075B5I2 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trbv4A0A075B5I2 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trbv4A0A075B5I2 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.3■■□□□ 1
Trbv4A0A075B5I2 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trbv4A0A075B5I2 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Trbv4A0A075B5I2 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trbv4A0A075B5I2 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Trbv4A0A075B5I2 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Trbv4A0A075B5I2 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.29■■□□□ 1
Trbv4A0A075B5I2 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.29■■□□□ 1
Trbv4A0A075B5I2 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trbv4A0A075B5I2 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Trbv4A0A075B5I2 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Trbv4A0A075B5I2 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Trbv4A0A075B5I2 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trbv4A0A075B5I2 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Trbv4A0A075B5I2 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trbv4A0A075B5I2 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.27■■□□□ 1
Trbv4A0A075B5I2 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.27■■□□□ 1
Trbv4A0A075B5I2 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trbv4A0A075B5I2 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.27■■□□□ 1
Trbv4A0A075B5I2 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trbv4A0A075B5I2 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.27■■□□□ 1
Trbv4A0A075B5I2 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Trbv4A0A075B5I2 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Trbv4A0A075B5I2 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Trbv4A0A075B5I2 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
Trbv4A0A075B5I2 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
Trbv4A0A075B5I2 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.27■□□□□ 0.99
Trbv4A0A075B5I2 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trbv4A0A075B5I2 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Trbv4A0A075B5I2 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.26■□□□□ 0.99
Trbv4A0A075B5I2 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Trbv4A0A075B5I2 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trbv4A0A075B5I2 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trbv4A0A075B5I2 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trbv4A0A075B5I2 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trbv4A0A075B5I2 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Trbv4A0A075B5I2 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trbv4A0A075B5I2 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trbv4A0A075B5I2 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trbv4A0A075B5I2 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.25■□□□□ 0.99
Trbv4A0A075B5I2 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.25■□□□□ 0.99
Trbv4A0A075B5I2 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trbv4A0A075B5I2 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trbv4A0A075B5I2 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trbv4A0A075B5I2 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Trbv4A0A075B5I2 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Trbv4A0A075B5I2 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trbv4A0A075B5I2 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trbv4A0A075B5I2 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Trbv4A0A075B5I2 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.24■□□□□ 0.99
Trbv4A0A075B5I2 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trbv4A0A075B5I2 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trbv4A0A075B5I2 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trbv4A0A075B5I2 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Trbv4A0A075B5I2 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Trbv4A0A075B5I2 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Trbv4A0A075B5I2 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
Trbv4A0A075B5I2 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trbv4A0A075B5I2 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.23■□□□□ 0.99
Trbv4A0A075B5I2 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.23■□□□□ 0.99
Trbv4A0A075B5I2 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trbv4A0A075B5I2 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trbv4A0A075B5I2 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trbv4A0A075B5I2 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.23■□□□□ 0.99
Trbv4A0A075B5I2 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trbv4A0A075B5I2 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trbv4A0A075B5I2 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Trbv4A0A075B5I2 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trbv4A0A075B5I2 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trbv4A0A075B5I2 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.21■□□□□ 0.99
Trbv4A0A075B5I2 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trbv4A0A075B5I2 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trbv4A0A075B5I2 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trbv4A0A075B5I2 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.2■□□□□ 0.98
Trbv4A0A075B5I2 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trbv4A0A075B5I2 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trbv4A0A075B5I2 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Trbv4A0A075B5I2 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trbv4A0A075B5I2 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.2■□□□□ 0.98
Trbv4A0A075B5I2 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.2■□□□□ 0.98
Trbv4A0A075B5I2 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
Trbv4A0A075B5I2 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trbv4A0A075B5I2 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trbv4A0A075B5I2 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trbv4A0A075B5I2 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.19■□□□□ 0.98
Trbv4A0A075B5I2 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trbv4A0A075B5I2 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.19■□□□□ 0.98
Trbv4A0A075B5I2 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 167.5 ms