Protein–RNA interactions for Protein: W4VSP7

Gm3238, MCG61407, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3238W4VSP7 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21,36■■□□□ 1,01
Gm3238W4VSP7 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC21,36■■□□□ 1,01
Gm3238W4VSP7 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21,34■■□□□ 1,01
Gm3238W4VSP7 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21,33■■□□□ 1,01
Gm3238W4VSP7 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21,32■■□□□ 1
Gm3238W4VSP7 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC21,31■■□□□ 1
Gm3238W4VSP7 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC21,3■■□□□ 1
Gm3238W4VSP7 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21,29■■□□□ 1
Gm3238W4VSP7 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21,29■■□□□ 1
Gm3238W4VSP7 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21,26■□□□□ 0,99
Gm3238W4VSP7 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21,26■□□□□ 0,99
Gm3238W4VSP7 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21,22■□□□□ 0,99
Gm3238W4VSP7 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21,16■□□□□ 0,98
Gm3238W4VSP7 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC21,15■□□□□ 0,98
Gm3238W4VSP7 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21,1■□□□□ 0,97
Gm3238W4VSP7 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC21,09■□□□□ 0,97
Gm3238W4VSP7 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21,08■□□□□ 0,97
Gm3238W4VSP7 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC21,07■□□□□ 0,96
Gm3238W4VSP7 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21,07■□□□□ 0,96
Gm3238W4VSP7 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21,07■□□□□ 0,96
Gm3238W4VSP7 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21,06■□□□□ 0,96
Gm3238W4VSP7 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC21,06■□□□□ 0,96
Gm3238W4VSP7 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21,04■□□□□ 0,96
Gm3238W4VSP7 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21,02■□□□□ 0,96
Gm3238W4VSP7 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0,95
Gm3238W4VSP7 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20,98■□□□□ 0,95
Gm3238W4VSP7 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC20,98■□□□□ 0,95
Gm3238W4VSP7 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC20,97■□□□□ 0,95
Gm3238W4VSP7 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20,95■□□□□ 0,95
Gm3238W4VSP7 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20,95■□□□□ 0,94
Gm3238W4VSP7 Gm5987-201ENSMUST00000196433 1151 ntBASIC20,95■□□□□ 0,94
Gm3238W4VSP7 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20,94■□□□□ 0,94
Gm3238W4VSP7 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20,93■□□□□ 0,94
Gm3238W4VSP7 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20,9■□□□□ 0,94
Gm3238W4VSP7 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC20,87■□□□□ 0,93
Gm3238W4VSP7 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20,87■□□□□ 0,93
Gm3238W4VSP7 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20,84■□□□□ 0,93
Gm3238W4VSP7 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20,83■□□□□ 0,93
Gm3238W4VSP7 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC20,83■□□□□ 0,93
Gm3238W4VSP7 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC20,83■□□□□ 0,93
Gm3238W4VSP7 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20,83■□□□□ 0,93
Gm3238W4VSP7 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20,81■□□□□ 0,92
Gm3238W4VSP7 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20,8■□□□□ 0,92
Gm3238W4VSP7 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20,79■□□□□ 0,92
Gm3238W4VSP7 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC20,78■□□□□ 0,92
Gm3238W4VSP7 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20,77■□□□□ 0,92
Gm3238W4VSP7 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC20,72■□□□□ 0,91
Gm3238W4VSP7 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20,72■□□□□ 0,91
Gm3238W4VSP7 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC20,72■□□□□ 0,91
Gm3238W4VSP7 Gm42596-201ENSMUST00000196305 1958 ntBASIC20,72■□□□□ 0,91
Gm3238W4VSP7 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20,71■□□□□ 0,91
Gm3238W4VSP7 Tdp2-203ENSMUST00000223804 1136 ntBASIC20,7■□□□□ 0,9
Gm3238W4VSP7 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20,68■□□□□ 0,9
Gm3238W4VSP7 Gm10524-201ENSMUST00000181931 1893 ntBASIC20,68■□□□□ 0,9
Gm3238W4VSP7 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20,68■□□□□ 0,9
Gm3238W4VSP7 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20,67■□□□□ 0,9
Gm3238W4VSP7 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20,64■□□□□ 0,89
Gm3238W4VSP7 AC166822.3-201ENSMUST00000227394 661 ntBASIC20,62■□□□□ 0,89
Gm3238W4VSP7 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20,61■□□□□ 0,89
Gm3238W4VSP7 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20,61■□□□□ 0,89
Gm3238W4VSP7 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20,6■□□□□ 0,89
Gm3238W4VSP7 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20,59■□□□□ 0,89
Gm3238W4VSP7 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20,59■□□□□ 0,89
Gm3238W4VSP7 Gm16148-201ENSMUST00000119653 893 ntBASIC20,58■□□□□ 0,89
Gm3238W4VSP7 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC20,56■□□□□ 0,88
Gm3238W4VSP7 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20,56■□□□□ 0,88
Gm3238W4VSP7 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20,55■□□□□ 0,88
Gm3238W4VSP7 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20,55■□□□□ 0,88
Gm3238W4VSP7 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20,55■□□□□ 0,88
Gm3238W4VSP7 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20,53■□□□□ 0,88
Gm3238W4VSP7 AL845457.1-201ENSMUST00000197244 68 ntBASIC20,53■□□□□ 0,88
Gm3238W4VSP7 Gm45855-201ENSMUST00000212546 880 ntBASIC20,52■□□□□ 0,88
Gm3238W4VSP7 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC20,5■□□□□ 0,87
Gm3238W4VSP7 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20,5■□□□□ 0,87
Gm3238W4VSP7 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20,5■□□□□ 0,87
Gm3238W4VSP7 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20,5■□□□□ 0,87
Gm3238W4VSP7 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20,5■□□□□ 0,87
Gm3238W4VSP7 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20,49■□□□□ 0,87
Gm3238W4VSP7 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC20,49■□□□□ 0,87
Gm3238W4VSP7 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20,48■□□□□ 0,87
Gm3238W4VSP7 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC20,48■□□□□ 0,87
Gm3238W4VSP7 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20,47■□□□□ 0,87
Gm3238W4VSP7 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20,47■□□□□ 0,87
Gm3238W4VSP7 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC20,46■□□□□ 0,87
Gm3238W4VSP7 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC20,46■□□□□ 0,87
Gm3238W4VSP7 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20,45■□□□□ 0,86
Gm3238W4VSP7 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20,43■□□□□ 0,86
Gm3238W4VSP7 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20,42■□□□□ 0,86
Gm3238W4VSP7 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC20,41■□□□□ 0,86
Gm3238W4VSP7 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC20,41■□□□□ 0,86
Gm3238W4VSP7 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20,4■□□□□ 0,86
Gm3238W4VSP7 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20,4■□□□□ 0,86
Gm3238W4VSP7 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20,39■□□□□ 0,85
Gm3238W4VSP7 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20,36■□□□□ 0,85
Gm3238W4VSP7 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20,36■□□□□ 0,85
Gm3238W4VSP7 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20,36■□□□□ 0,85
Gm3238W4VSP7 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC20,34■□□□□ 0,85
Gm3238W4VSP7 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20,34■□□□□ 0,85
Gm3238W4VSP7 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20,33■□□□□ 0,85
Gm3238W4VSP7 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20,33■□□□□ 0,85
Retrieved 100 of 76,532 protein–RNA pairs in 10,8 ms