Protein–RNA interactions for Protein: W4VSP7

Gm3238, MCG61407, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3238W4VSP7 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.36■■□□□ 1.01
Gm3238W4VSP7 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC21.36■■□□□ 1.01
Gm3238W4VSP7 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21.34■■□□□ 1.01
Gm3238W4VSP7 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Gm3238W4VSP7 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Gm3238W4VSP7 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC21.31■■□□□ 1
Gm3238W4VSP7 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC21.3■■□□□ 1
Gm3238W4VSP7 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Gm3238W4VSP7 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm3238W4VSP7 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Gm3238W4VSP7 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Gm3238W4VSP7 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm3238W4VSP7 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.16■□□□□ 0.98
Gm3238W4VSP7 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm3238W4VSP7 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gm3238W4VSP7 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Gm3238W4VSP7 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Gm3238W4VSP7 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm3238W4VSP7 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.07■□□□□ 0.96
Gm3238W4VSP7 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Gm3238W4VSP7 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Gm3238W4VSP7 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gm3238W4VSP7 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.04■□□□□ 0.96
Gm3238W4VSP7 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.02■□□□□ 0.96
Gm3238W4VSP7 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gm3238W4VSP7 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm3238W4VSP7 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm3238W4VSP7 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm3238W4VSP7 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Gm3238W4VSP7 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Gm3238W4VSP7 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.95■□□□□ 0.94
Gm3238W4VSP7 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gm3238W4VSP7 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gm3238W4VSP7 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Gm3238W4VSP7 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gm3238W4VSP7 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Gm3238W4VSP7 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.84■□□□□ 0.93
Gm3238W4VSP7 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Gm3238W4VSP7 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gm3238W4VSP7 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gm3238W4VSP7 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Gm3238W4VSP7 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Gm3238W4VSP7 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.8■□□□□ 0.92
Gm3238W4VSP7 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.79■□□□□ 0.92
Gm3238W4VSP7 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm3238W4VSP7 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Gm3238W4VSP7 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm3238W4VSP7 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm3238W4VSP7 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm3238W4VSP7 Gm42596-201ENSMUST00000196305 1958 ntBASIC20.72■□□□□ 0.91
Gm3238W4VSP7 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Gm3238W4VSP7 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.7■□□□□ 0.9
Gm3238W4VSP7 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm3238W4VSP7 Gm10524-201ENSMUST00000181931 1893 ntBASIC20.68■□□□□ 0.9
Gm3238W4VSP7 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Gm3238W4VSP7 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Gm3238W4VSP7 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Gm3238W4VSP7 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.62■□□□□ 0.89
Gm3238W4VSP7 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Gm3238W4VSP7 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm3238W4VSP7 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20.6■□□□□ 0.89
Gm3238W4VSP7 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm3238W4VSP7 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Gm3238W4VSP7 Gm16148-201ENSMUST00000119653 893 ntBASIC20.58■□□□□ 0.89
Gm3238W4VSP7 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm3238W4VSP7 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.56■□□□□ 0.88
Gm3238W4VSP7 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
Gm3238W4VSP7 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.55■□□□□ 0.88
Gm3238W4VSP7 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Gm3238W4VSP7 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm3238W4VSP7 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.53■□□□□ 0.88
Gm3238W4VSP7 Gm45855-201ENSMUST00000212546 880 ntBASIC20.52■□□□□ 0.88
Gm3238W4VSP7 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm3238W4VSP7 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Gm3238W4VSP7 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm3238W4VSP7 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Gm3238W4VSP7 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Gm3238W4VSP7 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm3238W4VSP7 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm3238W4VSP7 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm3238W4VSP7 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm3238W4VSP7 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Gm3238W4VSP7 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm3238W4VSP7 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gm3238W4VSP7 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC20.46■□□□□ 0.87
Gm3238W4VSP7 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.45■□□□□ 0.86
Gm3238W4VSP7 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Gm3238W4VSP7 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Gm3238W4VSP7 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Gm3238W4VSP7 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm3238W4VSP7 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.4■□□□□ 0.86
Gm3238W4VSP7 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Gm3238W4VSP7 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm3238W4VSP7 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm3238W4VSP7 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm3238W4VSP7 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm3238W4VSP7 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm3238W4VSP7 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm3238W4VSP7 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gm3238W4VSP7 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 112.4 ms