Protein–RNA interactions for Protein: V9GX31

Gm12728, Peptidyl-prolyl cis-trans isomerase, mousemouse

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12728V9GX31 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Gm12728V9GX31 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Gm12728V9GX31 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Gm12728V9GX31 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC21.78■■□□□ 1.08
Gm12728V9GX31 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Gm12728V9GX31 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Gm12728V9GX31 Gm25238-201ENSMUST00000174914 89 ntBASIC21.68■■□□□ 1.06
Gm12728V9GX31 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Gm12728V9GX31 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Gm12728V9GX31 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Gm12728V9GX31 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC21.6■■□□□ 1.05
Gm12728V9GX31 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Gm12728V9GX31 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21.58■■□□□ 1.05
Gm12728V9GX31 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Gm12728V9GX31 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Gm12728V9GX31 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
Gm12728V9GX31 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC21.55■■□□□ 1.04
Gm12728V9GX31 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Gm12728V9GX31 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Gm12728V9GX31 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Gm12728V9GX31 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21.53■■□□□ 1.04
Gm12728V9GX31 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Gm12728V9GX31 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Gm12728V9GX31 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.49■■□□□ 1.03
Gm12728V9GX31 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Gm12728V9GX31 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Gm12728V9GX31 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gm12728V9GX31 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Gm12728V9GX31 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Gm12728V9GX31 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.36■■□□□ 1.01
Gm12728V9GX31 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Gm12728V9GX31 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gm12728V9GX31 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC21.31■■□□□ 1
Gm12728V9GX31 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gm12728V9GX31 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Gm12728V9GX31 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Gm12728V9GX31 Zfp131-207ENSMUST00000224946 1783 ntBASIC21.25■□□□□ 0.99
Gm12728V9GX31 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21.25■□□□□ 0.99
Gm12728V9GX31 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
Gm12728V9GX31 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm12728V9GX31 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm12728V9GX31 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm12728V9GX31 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.16■□□□□ 0.98
Gm12728V9GX31 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Gm12728V9GX31 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.14■□□□□ 0.97
Gm12728V9GX31 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Gm12728V9GX31 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gm12728V9GX31 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Gm12728V9GX31 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gm12728V9GX31 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Gm12728V9GX31 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gm12728V9GX31 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Gm12728V9GX31 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gm12728V9GX31 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm12728V9GX31 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21.05■□□□□ 0.96
Gm12728V9GX31 Rab21-202ENSMUST00000218831 843 ntBASIC21.05■□□□□ 0.96
Gm12728V9GX31 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm12728V9GX31 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gm12728V9GX31 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Gm12728V9GX31 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.02■□□□□ 0.95
Gm12728V9GX31 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Gm12728V9GX31 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Gm12728V9GX31 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC21.01■□□□□ 0.95
Gm12728V9GX31 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21.01■□□□□ 0.95
Gm12728V9GX31 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Gm12728V9GX31 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gm12728V9GX31 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm12728V9GX31 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.97■□□□□ 0.95
Gm12728V9GX31 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20.97■□□□□ 0.95
Gm12728V9GX31 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Gm12728V9GX31 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gm12728V9GX31 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Gm12728V9GX31 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Gm12728V9GX31 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Gm12728V9GX31 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Gm12728V9GX31 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20.9■□□□□ 0.94
Gm12728V9GX31 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Gm12728V9GX31 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gm12728V9GX31 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm12728V9GX31 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.88■□□□□ 0.93
Gm12728V9GX31 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Gm12728V9GX31 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gm12728V9GX31 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gm12728V9GX31 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Gm12728V9GX31 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gm12728V9GX31 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gm12728V9GX31 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm12728V9GX31 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm12728V9GX31 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC20.8■□□□□ 0.92
Gm12728V9GX31 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Gm12728V9GX31 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm12728V9GX31 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Gm12728V9GX31 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm12728V9GX31 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm12728V9GX31 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
Gm12728V9GX31 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm12728V9GX31 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm12728V9GX31 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm12728V9GX31 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
Gm12728V9GX31 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 7.9 ms