Protein–RNA interactions for Protein: Q9ET35

Tnfrsf13b, Tumor necrosis factor receptor superfamily member 13B, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13bQ9ET35 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Tnfrsf13bQ9ET35 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tnfrsf13bQ9ET35 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tnfrsf13bQ9ET35 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tnfrsf13bQ9ET35 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC21.64■■□□□ 1.05
Tnfrsf13bQ9ET35 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tnfrsf13bQ9ET35 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tnfrsf13bQ9ET35 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Tnfrsf13bQ9ET35 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tnfrsf13bQ9ET35 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tnfrsf13bQ9ET35 Gm27325-201ENSMUST00000175467 74 ntBASIC21.54■■□□□ 1.04
Tnfrsf13bQ9ET35 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.54■■□□□ 1.04
Tnfrsf13bQ9ET35 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tnfrsf13bQ9ET35 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tnfrsf13bQ9ET35 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.45■■□□□ 1.02
Tnfrsf13bQ9ET35 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Tnfrsf13bQ9ET35 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.4■■□□□ 1.02
Tnfrsf13bQ9ET35 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tnfrsf13bQ9ET35 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Tnfrsf13bQ9ET35 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Tnfrsf13bQ9ET35 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tnfrsf13bQ9ET35 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC21.31■■□□□ 1
Tnfrsf13bQ9ET35 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tnfrsf13bQ9ET35 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tnfrsf13bQ9ET35 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tnfrsf13bQ9ET35 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tnfrsf13bQ9ET35 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tnfrsf13bQ9ET35 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tnfrsf13bQ9ET35 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21.24■□□□□ 0.99
Tnfrsf13bQ9ET35 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.22■□□□□ 0.99
Tnfrsf13bQ9ET35 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tnfrsf13bQ9ET35 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tnfrsf13bQ9ET35 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tnfrsf13bQ9ET35 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tnfrsf13bQ9ET35 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.17■□□□□ 0.98
Tnfrsf13bQ9ET35 Zfp131-207ENSMUST00000224946 1783 ntBASIC21.15■□□□□ 0.98
Tnfrsf13bQ9ET35 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tnfrsf13bQ9ET35 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tnfrsf13bQ9ET35 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tnfrsf13bQ9ET35 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tnfrsf13bQ9ET35 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tnfrsf13bQ9ET35 Gm25238-201ENSMUST00000174914 89 ntBASIC21.12■□□□□ 0.97
Tnfrsf13bQ9ET35 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21.12■□□□□ 0.97
Tnfrsf13bQ9ET35 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Tnfrsf13bQ9ET35 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Tnfrsf13bQ9ET35 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Tnfrsf13bQ9ET35 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC21.05■□□□□ 0.96
Tnfrsf13bQ9ET35 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.05■□□□□ 0.96
Tnfrsf13bQ9ET35 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Tnfrsf13bQ9ET35 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tnfrsf13bQ9ET35 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tnfrsf13bQ9ET35 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Tnfrsf13bQ9ET35 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Tnfrsf13bQ9ET35 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tnfrsf13bQ9ET35 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tnfrsf13bQ9ET35 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tnfrsf13bQ9ET35 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Tnfrsf13bQ9ET35 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tnfrsf13bQ9ET35 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC20.96■□□□□ 0.95
Tnfrsf13bQ9ET35 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
Tnfrsf13bQ9ET35 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Tnfrsf13bQ9ET35 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tnfrsf13bQ9ET35 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC20.88■□□□□ 0.93
Tnfrsf13bQ9ET35 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
Tnfrsf13bQ9ET35 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tnfrsf13bQ9ET35 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfrsf13bQ9ET35 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.84■□□□□ 0.93
Tnfrsf13bQ9ET35 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.84■□□□□ 0.93
Tnfrsf13bQ9ET35 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tnfrsf13bQ9ET35 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Tnfrsf13bQ9ET35 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnfrsf13bQ9ET35 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfrsf13bQ9ET35 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tnfrsf13bQ9ET35 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Tnfrsf13bQ9ET35 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC20.75■□□□□ 0.91
Tnfrsf13bQ9ET35 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tnfrsf13bQ9ET35 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tnfrsf13bQ9ET35 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tnfrsf13bQ9ET35 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tnfrsf13bQ9ET35 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tnfrsf13bQ9ET35 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
Tnfrsf13bQ9ET35 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfrsf13bQ9ET35 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfrsf13bQ9ET35 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfrsf13bQ9ET35 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC20.69■□□□□ 0.9
Tnfrsf13bQ9ET35 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnfrsf13bQ9ET35 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.67■□□□□ 0.9
Tnfrsf13bQ9ET35 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfrsf13bQ9ET35 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfrsf13bQ9ET35 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Tnfrsf13bQ9ET35 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfrsf13bQ9ET35 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfrsf13bQ9ET35 Rab21-202ENSMUST00000218831 843 ntBASIC20.63■□□□□ 0.89
Tnfrsf13bQ9ET35 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfrsf13bQ9ET35 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfrsf13bQ9ET35 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.61■□□□□ 0.89
Tnfrsf13bQ9ET35 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfrsf13bQ9ET35 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.6■□□□□ 0.89
Tnfrsf13bQ9ET35 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnfrsf13bQ9ET35 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms