Protein–RNA interactions for Protein: Q9D968

Hcfc2, Host cell factor 2, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc2Q9D968 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hcfc2Q9D968 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hcfc2Q9D968 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Hcfc2Q9D968 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Hcfc2Q9D968 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hcfc2Q9D968 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hcfc2Q9D968 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hcfc2Q9D968 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC20.46■□□□□ 0.87
Hcfc2Q9D968 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hcfc2Q9D968 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hcfc2Q9D968 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Hcfc2Q9D968 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Hcfc2Q9D968 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Hcfc2Q9D968 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Hcfc2Q9D968 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hcfc2Q9D968 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hcfc2Q9D968 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hcfc2Q9D968 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hcfc2Q9D968 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hcfc2Q9D968 Gm27325-201ENSMUST00000175467 74 ntBASIC20.24■□□□□ 0.83
Hcfc2Q9D968 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.23■□□□□ 0.83
Hcfc2Q9D968 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hcfc2Q9D968 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC20.2■□□□□ 0.82
Hcfc2Q9D968 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hcfc2Q9D968 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hcfc2Q9D968 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
Hcfc2Q9D968 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hcfc2Q9D968 Zxda-201ENSMUST00000117281 2621 ntBASIC20.1■□□□□ 0.81
Hcfc2Q9D968 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hcfc2Q9D968 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Hcfc2Q9D968 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hcfc2Q9D968 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hcfc2Q9D968 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hcfc2Q9D968 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Hcfc2Q9D968 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hcfc2Q9D968 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC20.01■□□□□ 0.79
Hcfc2Q9D968 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC20■□□□□ 0.79
Hcfc2Q9D968 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Hcfc2Q9D968 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hcfc2Q9D968 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hcfc2Q9D968 Gm2415-204ENSMUST00000190235 2004 ntBASIC19.95■□□□□ 0.78
Hcfc2Q9D968 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC19.93■□□□□ 0.78
Hcfc2Q9D968 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Hcfc2Q9D968 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Hcfc2Q9D968 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hcfc2Q9D968 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hcfc2Q9D968 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hcfc2Q9D968 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.9■□□□□ 0.78
Hcfc2Q9D968 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC19.89■□□□□ 0.77
Hcfc2Q9D968 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hcfc2Q9D968 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hcfc2Q9D968 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Hcfc2Q9D968 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hcfc2Q9D968 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Hcfc2Q9D968 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hcfc2Q9D968 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hcfc2Q9D968 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hcfc2Q9D968 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC19.82■□□□□ 0.76
Hcfc2Q9D968 Gm25238-201ENSMUST00000174914 89 ntBASIC19.82■□□□□ 0.76
Hcfc2Q9D968 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hcfc2Q9D968 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Hcfc2Q9D968 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hcfc2Q9D968 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hcfc2Q9D968 Zfp131-207ENSMUST00000224946 1783 ntBASIC19.75■□□□□ 0.75
Hcfc2Q9D968 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hcfc2Q9D968 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC19.72■□□□□ 0.75
Hcfc2Q9D968 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hcfc2Q9D968 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Hcfc2Q9D968 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hcfc2Q9D968 Gm6658-202ENSMUST00000209493 1885 ntBASIC19.69■□□□□ 0.74
Hcfc2Q9D968 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.67■□□□□ 0.74
Hcfc2Q9D968 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hcfc2Q9D968 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hcfc2Q9D968 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hcfc2Q9D968 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Hcfc2Q9D968 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Hcfc2Q9D968 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hcfc2Q9D968 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hcfc2Q9D968 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hcfc2Q9D968 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hcfc2Q9D968 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hcfc2Q9D968 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hcfc2Q9D968 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hcfc2Q9D968 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hcfc2Q9D968 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hcfc2Q9D968 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.63■□□□□ 0.73
Hcfc2Q9D968 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.63■□□□□ 0.73
Hcfc2Q9D968 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Hcfc2Q9D968 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Hcfc2Q9D968 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hcfc2Q9D968 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.6■□□□□ 0.73
Hcfc2Q9D968 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC19.59■□□□□ 0.73
Hcfc2Q9D968 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Hcfc2Q9D968 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hcfc2Q9D968 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hcfc2Q9D968 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hcfc2Q9D968 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hcfc2Q9D968 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC19.56■□□□□ 0.72
Hcfc2Q9D968 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
Hcfc2Q9D968 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 94.6 ms