Protein–RNA interactions for Protein: Q9D4E6

Pabpc6, Polyadenylate-binding protein, mousemouse

Known RBP Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpc6Q9D4E6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31.44■■■□□ 2.62
Pabpc6Q9D4E6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31.43■■■□□ 2.62
Pabpc6Q9D4E6 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC31.4■■■□□ 2.62
Pabpc6Q9D4E6 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Pabpc6Q9D4E6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC31.4■■■□□ 2.62
Pabpc6Q9D4E6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31.39■■■□□ 2.62
Pabpc6Q9D4E6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Pabpc6Q9D4E6 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC31.33■■■□□ 2.61
Pabpc6Q9D4E6 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC31.32■■■□□ 2.6
Pabpc6Q9D4E6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC31.3■■■□□ 2.6
Pabpc6Q9D4E6 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Pabpc6Q9D4E6 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Pabpc6Q9D4E6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC31.21■■■□□ 2.59
Pabpc6Q9D4E6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31.16■■■□□ 2.58
Pabpc6Q9D4E6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
Pabpc6Q9D4E6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC31.12■■■□□ 2.57
Pabpc6Q9D4E6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Pabpc6Q9D4E6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Pabpc6Q9D4E6 Gm26115-201ENSMUST00000175605 87 ntBASIC31.05■■■□□ 2.56
Pabpc6Q9D4E6 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Pabpc6Q9D4E6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
Pabpc6Q9D4E6 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Pabpc6Q9D4E6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Pabpc6Q9D4E6 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Pabpc6Q9D4E6 Gm8109-201ENSMUST00000194076 746 ntBASIC30.95■■■□□ 2.55
Pabpc6Q9D4E6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
Pabpc6Q9D4E6 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC30.91■■■□□ 2.54
Pabpc6Q9D4E6 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC30.9■■■□□ 2.54
Pabpc6Q9D4E6 Gm17082-201ENSMUST00000166043 1091 ntBASIC30.89■■■□□ 2.54
Pabpc6Q9D4E6 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Pabpc6Q9D4E6 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Pabpc6Q9D4E6 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Pabpc6Q9D4E6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.8■■■□□ 2.52
Pabpc6Q9D4E6 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Pabpc6Q9D4E6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Pabpc6Q9D4E6 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Pabpc6Q9D4E6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Pabpc6Q9D4E6 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC30.76■■■□□ 2.52
Pabpc6Q9D4E6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
Pabpc6Q9D4E6 Zfp131-207ENSMUST00000224946 1783 ntBASIC30.67■■■□□ 2.5
Pabpc6Q9D4E6 Gm27322-201ENSMUST00000184007 104 ntBASIC30.67■■■□□ 2.5
Pabpc6Q9D4E6 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC30.66■■■□□ 2.5
Pabpc6Q9D4E6 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Pabpc6Q9D4E6 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC30.65■■■□□ 2.5
Pabpc6Q9D4E6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC30.62■■■□□ 2.49
Pabpc6Q9D4E6 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC30.59■■■□□ 2.49
Pabpc6Q9D4E6 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Pabpc6Q9D4E6 AL845457.1-201ENSMUST00000197244 68 ntBASIC30.54■■■□□ 2.48
Pabpc6Q9D4E6 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Pabpc6Q9D4E6 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Pabpc6Q9D4E6 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC30.5■■■□□ 2.47
Pabpc6Q9D4E6 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Pabpc6Q9D4E6 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
Pabpc6Q9D4E6 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Pabpc6Q9D4E6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Pabpc6Q9D4E6 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC30.33■■■□□ 2.45
Pabpc6Q9D4E6 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Pabpc6Q9D4E6 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Pabpc6Q9D4E6 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Pabpc6Q9D4E6 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Pabpc6Q9D4E6 AC166822.3-201ENSMUST00000227394 661 ntBASIC30.28■■■□□ 2.44
Pabpc6Q9D4E6 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Pabpc6Q9D4E6 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC30.24■■■□□ 2.43
Pabpc6Q9D4E6 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC30.22■■■□□ 2.43
Pabpc6Q9D4E6 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Pabpc6Q9D4E6 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Pabpc6Q9D4E6 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Pabpc6Q9D4E6 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC30.16■■■□□ 2.42
Pabpc6Q9D4E6 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Pabpc6Q9D4E6 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Pabpc6Q9D4E6 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC30.11■■■□□ 2.41
Pabpc6Q9D4E6 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC30.1■■■□□ 2.41
Pabpc6Q9D4E6 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Pabpc6Q9D4E6 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Pabpc6Q9D4E6 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Pabpc6Q9D4E6 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
Pabpc6Q9D4E6 Gm24804-201ENSMUST00000174982 85 ntBASIC30.02■■■□□ 2.4
Pabpc6Q9D4E6 Mipep-204ENSMUST00000225043 1548 ntBASIC30.01■■■□□ 2.4
Pabpc6Q9D4E6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC29.99■■■□□ 2.39
Pabpc6Q9D4E6 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Pabpc6Q9D4E6 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Pabpc6Q9D4E6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Pabpc6Q9D4E6 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC29.95■■■□□ 2.38
Pabpc6Q9D4E6 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Pabpc6Q9D4E6 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
Pabpc6Q9D4E6 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Pabpc6Q9D4E6 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC29.87■■■□□ 2.37
Pabpc6Q9D4E6 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Pabpc6Q9D4E6 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
Pabpc6Q9D4E6 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
Pabpc6Q9D4E6 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
Pabpc6Q9D4E6 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Pabpc6Q9D4E6 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC29.82■■■□□ 2.36
Pabpc6Q9D4E6 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Pabpc6Q9D4E6 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC29.76■■■□□ 2.35
Pabpc6Q9D4E6 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Pabpc6Q9D4E6 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC29.72■■■□□ 2.35
Pabpc6Q9D4E6 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
Pabpc6Q9D4E6 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
Pabpc6Q9D4E6 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms