Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC29.38■■■□□ 2.29
Ssr1Q9CY50 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Ssr1Q9CY50 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Ssr1Q9CY50 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC29.31■■■□□ 2.28
Ssr1Q9CY50 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Ssr1Q9CY50 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Ssr1Q9CY50 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.28■■■□□ 2.28
Ssr1Q9CY50 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.25■■■□□ 2.27
Ssr1Q9CY50 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC29.21■■■□□ 2.27
Ssr1Q9CY50 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.17■■■□□ 2.26
Ssr1Q9CY50 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC29.12■■■□□ 2.25
Ssr1Q9CY50 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Ssr1Q9CY50 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC29.07■■■□□ 2.24
Ssr1Q9CY50 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Ssr1Q9CY50 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.99■■■□□ 2.23
Ssr1Q9CY50 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.96■■■□□ 2.23
Ssr1Q9CY50 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Ssr1Q9CY50 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
Ssr1Q9CY50 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Ssr1Q9CY50 Rab21-202ENSMUST00000218831 843 ntBASIC28.88■■■□□ 2.21
Ssr1Q9CY50 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Ssr1Q9CY50 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Ssr1Q9CY50 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Ssr1Q9CY50 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC28.82■■■□□ 2.2
Ssr1Q9CY50 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Ssr1Q9CY50 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
Ssr1Q9CY50 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Ssr1Q9CY50 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Ssr1Q9CY50 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC28.76■■■□□ 2.2
Ssr1Q9CY50 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
Ssr1Q9CY50 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
Ssr1Q9CY50 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.72■■■□□ 2.19
Ssr1Q9CY50 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Ssr1Q9CY50 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.71■■■□□ 2.19
Ssr1Q9CY50 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC28.7■■■□□ 2.19
Ssr1Q9CY50 Zfp131-207ENSMUST00000224946 1783 ntBASIC28.62■■■□□ 2.17
Ssr1Q9CY50 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.62■■■□□ 2.17
Ssr1Q9CY50 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC28.61■■■□□ 2.17
Ssr1Q9CY50 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC28.61■■■□□ 2.17
Ssr1Q9CY50 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.59■■■□□ 2.17
Ssr1Q9CY50 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Ssr1Q9CY50 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Ssr1Q9CY50 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Ssr1Q9CY50 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.58■■■□□ 2.17
Ssr1Q9CY50 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Ssr1Q9CY50 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
Ssr1Q9CY50 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
Ssr1Q9CY50 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC28.56■■■□□ 2.16
Ssr1Q9CY50 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
Ssr1Q9CY50 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC28.51■■■□□ 2.16
Ssr1Q9CY50 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC28.51■■■□□ 2.15
Ssr1Q9CY50 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC28.49■■■□□ 2.15
Ssr1Q9CY50 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Ssr1Q9CY50 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.47■■■□□ 2.15
Ssr1Q9CY50 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Ssr1Q9CY50 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Ssr1Q9CY50 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.41■■■□□ 2.14
Ssr1Q9CY50 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC28.37■■■□□ 2.13
Ssr1Q9CY50 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC28.36■■■□□ 2.13
Ssr1Q9CY50 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Ssr1Q9CY50 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Ssr1Q9CY50 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Ssr1Q9CY50 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Ssr1Q9CY50 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Ssr1Q9CY50 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Ssr1Q9CY50 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
Ssr1Q9CY50 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Ssr1Q9CY50 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC28.26■■■□□ 2.11
Ssr1Q9CY50 Gm25262-201ENSMUST00000174934 133 ntBASIC28.26■■■□□ 2.11
Ssr1Q9CY50 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
Ssr1Q9CY50 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Ssr1Q9CY50 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Ssr1Q9CY50 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Ssr1Q9CY50 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Ssr1Q9CY50 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
Ssr1Q9CY50 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC28.12■■■□□ 2.09
Ssr1Q9CY50 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
Ssr1Q9CY50 Gm2415-204ENSMUST00000190235 2004 ntBASIC28.08■■■□□ 2.09
Ssr1Q9CY50 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Ssr1Q9CY50 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Ssr1Q9CY50 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Ssr1Q9CY50 AL845457.1-201ENSMUST00000197244 68 ntBASIC28.01■■■□□ 2.07
Ssr1Q9CY50 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Ssr1Q9CY50 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28■■■□□ 2.07
Ssr1Q9CY50 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC27.99■■■□□ 2.07
Ssr1Q9CY50 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Ssr1Q9CY50 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC27.95■■■□□ 2.06
Ssr1Q9CY50 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC27.95■■■□□ 2.06
Ssr1Q9CY50 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC27.93■■■□□ 2.06
Ssr1Q9CY50 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Ssr1Q9CY50 Gm6658-202ENSMUST00000209493 1885 ntBASIC27.92■■■□□ 2.06
Ssr1Q9CY50 Mipep-204ENSMUST00000225043 1548 ntBASIC27.86■■■□□ 2.05
Ssr1Q9CY50 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Ssr1Q9CY50 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Ssr1Q9CY50 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Ssr1Q9CY50 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
Ssr1Q9CY50 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC27.79■■■□□ 2.04
Ssr1Q9CY50 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.79■■■□□ 2.04
Ssr1Q9CY50 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Ssr1Q9CY50 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms