Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26,32■■□□□ 1,8
Khdc3Q9CWU5 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26,32■■□□□ 1,8
Khdc3Q9CWU5 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26,3■■□□□ 1,8
Khdc3Q9CWU5 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26,3■■□□□ 1,8
Khdc3Q9CWU5 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26,29■■□□□ 1,8
Khdc3Q9CWU5 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26,29■■□□□ 1,8
Khdc3Q9CWU5 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26,28■■□□□ 1,8
Khdc3Q9CWU5 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26,23■■□□□ 1,79
Khdc3Q9CWU5 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26,22■■□□□ 1,79
Khdc3Q9CWU5 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26,18■■□□□ 1,78
Khdc3Q9CWU5 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26,16■■□□□ 1,78
Khdc3Q9CWU5 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26,16■■□□□ 1,78
Khdc3Q9CWU5 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC26,14■■□□□ 1,78
Khdc3Q9CWU5 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26,14■■□□□ 1,78
Khdc3Q9CWU5 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26,12■■□□□ 1,77
Khdc3Q9CWU5 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26,11■■□□□ 1,77
Khdc3Q9CWU5 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26,09■■□□□ 1,77
Khdc3Q9CWU5 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26,07■■□□□ 1,76
Khdc3Q9CWU5 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26,04■■□□□ 1,76
Khdc3Q9CWU5 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26,02■■□□□ 1,76
Khdc3Q9CWU5 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC25,99■■□□□ 1,75
Khdc3Q9CWU5 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC25,99■■□□□ 1,75
Khdc3Q9CWU5 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC25,98■■□□□ 1,75
Khdc3Q9CWU5 Gm25262-201ENSMUST00000174934 133 ntBASIC25,97■■□□□ 1,75
Khdc3Q9CWU5 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25,96■■□□□ 1,75
Khdc3Q9CWU5 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25,93■■□□□ 1,74
Khdc3Q9CWU5 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC25,93■■□□□ 1,74
Khdc3Q9CWU5 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25,93■■□□□ 1,74
Khdc3Q9CWU5 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC25,91■■□□□ 1,74
Khdc3Q9CWU5 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25,9■■□□□ 1,74
Khdc3Q9CWU5 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC25,89■■□□□ 1,74
Khdc3Q9CWU5 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC25,88■■□□□ 1,73
Khdc3Q9CWU5 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC25,88■■□□□ 1,73
Khdc3Q9CWU5 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC25,87■■□□□ 1,73
Khdc3Q9CWU5 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC25,87■■□□□ 1,73
Khdc3Q9CWU5 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC25,86■■□□□ 1,73
Khdc3Q9CWU5 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC25,85■■□□□ 1,73
Khdc3Q9CWU5 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC25,84■■□□□ 1,73
Khdc3Q9CWU5 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25,79■■□□□ 1,72
Khdc3Q9CWU5 Zfp131-207ENSMUST00000224946 1783 ntBASIC25,79■■□□□ 1,72
Khdc3Q9CWU5 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC25,74■■□□□ 1,71
Khdc3Q9CWU5 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25,73■■□□□ 1,71
Khdc3Q9CWU5 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25,69■■□□□ 1,7
Khdc3Q9CWU5 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25,66■■□□□ 1,7
Khdc3Q9CWU5 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25,62■■□□□ 1,69
Khdc3Q9CWU5 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25,59■■□□□ 1,69
Khdc3Q9CWU5 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC25,58■■□□□ 1,69
Khdc3Q9CWU5 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25,57■■□□□ 1,68
Khdc3Q9CWU5 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC25,57■■□□□ 1,68
Khdc3Q9CWU5 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25,57■■□□□ 1,68
Khdc3Q9CWU5 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25,54■■□□□ 1,68
Khdc3Q9CWU5 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC25,53■■□□□ 1,68
Khdc3Q9CWU5 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25,51■■□□□ 1,67
Khdc3Q9CWU5 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25,46■■□□□ 1,67
Khdc3Q9CWU5 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25,46■■□□□ 1,67
Khdc3Q9CWU5 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25,44■■□□□ 1,66
Khdc3Q9CWU5 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC25,44■■□□□ 1,66
Khdc3Q9CWU5 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC25,42■■□□□ 1,66
Khdc3Q9CWU5 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25,42■■□□□ 1,66
Khdc3Q9CWU5 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25,41■■□□□ 1,66
Khdc3Q9CWU5 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC25,41■■□□□ 1,66
Khdc3Q9CWU5 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25,41■■□□□ 1,66
Khdc3Q9CWU5 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25,39■■□□□ 1,65
Khdc3Q9CWU5 AL845457.1-201ENSMUST00000197244 68 ntBASIC25,38■■□□□ 1,65
Khdc3Q9CWU5 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC25,37■■□□□ 1,65
Khdc3Q9CWU5 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC25,36■■□□□ 1,65
Khdc3Q9CWU5 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC25,35■■□□□ 1,65
Khdc3Q9CWU5 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC25,28■■□□□ 1,64
Khdc3Q9CWU5 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25,28■■□□□ 1,64
Khdc3Q9CWU5 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25,28■■□□□ 1,64
Khdc3Q9CWU5 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25,28■■□□□ 1,64
Khdc3Q9CWU5 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25,27■■□□□ 1,64
Khdc3Q9CWU5 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC25,26■■□□□ 1,63
Khdc3Q9CWU5 Gm17082-201ENSMUST00000166043 1091 ntBASIC25,24■■□□□ 1,63
Khdc3Q9CWU5 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25,23■■□□□ 1,63
Khdc3Q9CWU5 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25,23■■□□□ 1,63
Khdc3Q9CWU5 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC25,2■■□□□ 1,63
Khdc3Q9CWU5 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25,19■■□□□ 1,62
Khdc3Q9CWU5 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC25,19■■□□□ 1,62
Khdc3Q9CWU5 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC25,18■■□□□ 1,62
Khdc3Q9CWU5 Gm27322-201ENSMUST00000184007 104 ntBASIC25,18■■□□□ 1,62
Khdc3Q9CWU5 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC25,17■■□□□ 1,62
Khdc3Q9CWU5 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC25,17■■□□□ 1,62
Khdc3Q9CWU5 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC25,15■■□□□ 1,62
Khdc3Q9CWU5 Mipep-204ENSMUST00000225043 1548 ntBASIC25,13■■□□□ 1,61
Khdc3Q9CWU5 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25,13■■□□□ 1,61
Khdc3Q9CWU5 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC25,12■■□□□ 1,61
Khdc3Q9CWU5 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25,12■■□□□ 1,61
Khdc3Q9CWU5 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC25,11■■□□□ 1,61
Khdc3Q9CWU5 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25,11■■□□□ 1,61
Khdc3Q9CWU5 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC25,11■■□□□ 1,61
Khdc3Q9CWU5 Gm26115-201ENSMUST00000175605 87 ntBASIC25,1■■□□□ 1,61
Khdc3Q9CWU5 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC25,09■■□□□ 1,61
Khdc3Q9CWU5 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25,08■■□□□ 1,61
Khdc3Q9CWU5 Gm8109-201ENSMUST00000194076 746 ntBASIC25,06■■□□□ 1,6
Khdc3Q9CWU5 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25,04■■□□□ 1,6
Khdc3Q9CWU5 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC25,04■■□□□ 1,6
Khdc3Q9CWU5 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC25,04■■□□□ 1,6
Khdc3Q9CWU5 Gm2415-204ENSMUST00000190235 2004 ntBASIC25,03■■□□□ 1,6
Khdc3Q9CWU5 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC25,02■■□□□ 1,6
Retrieved 100 of 76,532 protein–RNA pairs in 31,9 ms