Protein–RNA interactions for Protein: Q9CQL6

Mrpl35, 39S ribosomal protein L35, mitochondrial, mousemouse

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl35Q9CQL6 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Mrpl35Q9CQL6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Mrpl35Q9CQL6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mrpl35Q9CQL6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Mrpl35Q9CQL6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mrpl35Q9CQL6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mrpl35Q9CQL6 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mrpl35Q9CQL6 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC20.23■□□□□ 0.83
Mrpl35Q9CQL6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mrpl35Q9CQL6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mrpl35Q9CQL6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20.22■□□□□ 0.83
Mrpl35Q9CQL6 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mrpl35Q9CQL6 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mrpl35Q9CQL6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mrpl35Q9CQL6 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC20.2■□□□□ 0.82
Mrpl35Q9CQL6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Mrpl35Q9CQL6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Mrpl35Q9CQL6 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Mrpl35Q9CQL6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.13■□□□□ 0.81
Mrpl35Q9CQL6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Mrpl35Q9CQL6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.09■□□□□ 0.81
Mrpl35Q9CQL6 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Mrpl35Q9CQL6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mrpl35Q9CQL6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Mrpl35Q9CQL6 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mrpl35Q9CQL6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Mrpl35Q9CQL6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20■□□□□ 0.79
Mrpl35Q9CQL6 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Mrpl35Q9CQL6 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Mrpl35Q9CQL6 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Mrpl35Q9CQL6 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Mrpl35Q9CQL6 Gm26115-201ENSMUST00000175605 87 ntBASIC19.92■□□□□ 0.78
Mrpl35Q9CQL6 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
Mrpl35Q9CQL6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Mrpl35Q9CQL6 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Mrpl35Q9CQL6 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC19.88■□□□□ 0.77
Mrpl35Q9CQL6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Mrpl35Q9CQL6 Gm8109-201ENSMUST00000194076 746 ntBASIC19.85■□□□□ 0.77
Mrpl35Q9CQL6 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Mrpl35Q9CQL6 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Mrpl35Q9CQL6 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Mrpl35Q9CQL6 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Mrpl35Q9CQL6 Gm17082-201ENSMUST00000166043 1091 ntBASIC19.8■□□□□ 0.76
Mrpl35Q9CQL6 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mrpl35Q9CQL6 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Mrpl35Q9CQL6 Zfp131-207ENSMUST00000224946 1783 ntBASIC19.78■□□□□ 0.76
Mrpl35Q9CQL6 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC19.75■□□□□ 0.75
Mrpl35Q9CQL6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Mrpl35Q9CQL6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Mrpl35Q9CQL6 Gm27322-201ENSMUST00000184007 104 ntBASIC19.73■□□□□ 0.75
Mrpl35Q9CQL6 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Mrpl35Q9CQL6 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Mrpl35Q9CQL6 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Mrpl35Q9CQL6 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Mrpl35Q9CQL6 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Mrpl35Q9CQL6 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Mrpl35Q9CQL6 AL845457.1-201ENSMUST00000197244 68 ntBASIC19.66■□□□□ 0.74
Mrpl35Q9CQL6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
Mrpl35Q9CQL6 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Mrpl35Q9CQL6 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mrpl35Q9CQL6 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mrpl35Q9CQL6 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC19.62■□□□□ 0.73
Mrpl35Q9CQL6 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Mrpl35Q9CQL6 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mrpl35Q9CQL6 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mrpl35Q9CQL6 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Mrpl35Q9CQL6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Mrpl35Q9CQL6 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Mrpl35Q9CQL6 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Mrpl35Q9CQL6 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Mrpl35Q9CQL6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Mrpl35Q9CQL6 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Mrpl35Q9CQL6 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC19.47■□□□□ 0.71
Mrpl35Q9CQL6 AC166822.3-201ENSMUST00000227394 661 ntBASIC19.46■□□□□ 0.71
Mrpl35Q9CQL6 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Mrpl35Q9CQL6 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Mrpl35Q9CQL6 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mrpl35Q9CQL6 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Mrpl35Q9CQL6 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Mrpl35Q9CQL6 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Mrpl35Q9CQL6 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Mrpl35Q9CQL6 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Mrpl35Q9CQL6 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Mrpl35Q9CQL6 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Mrpl35Q9CQL6 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Mrpl35Q9CQL6 Mipep-204ENSMUST00000225043 1548 ntBASIC19.35■□□□□ 0.69
Mrpl35Q9CQL6 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mrpl35Q9CQL6 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mrpl35Q9CQL6 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Mrpl35Q9CQL6 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Mrpl35Q9CQL6 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.32■□□□□ 0.68
Mrpl35Q9CQL6 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mrpl35Q9CQL6 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Mrpl35Q9CQL6 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC19.31■□□□□ 0.68
Mrpl35Q9CQL6 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Mrpl35Q9CQL6 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mrpl35Q9CQL6 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mrpl35Q9CQL6 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mrpl35Q9CQL6 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mrpl35Q9CQL6 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms